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The map label for this gene is bdlA [H]

Identifier: 158422650

GI number: 158422650

Start: 1150973

End: 1152445

Strand: Direct

Name: bdlA [H]

Synonym: AZC_1026

Alternate gene names: 158422650

Gene position: 1150973-1152445 (Clockwise)

Preceding gene: 158422649

Following gene: 158422651

Centisome position: 21.43

GC content: 64.22

Gene sequence:

>1473_bases
TTGCATATGTTCTCTTCTCAGGCGGATGCCAAGCTGGCCGCGATCCAAAAATCTCAGGCCATCATCGAGTTCGAACCGGA
TGGCACGATCATTTCGGCCAACCCCAATTTCCTCTCCGCGATGGGCTATACGCTCGCAGAGATCCGCGGCAAGCACCACT
CCCTTTTCATGCCGCCCGAAGAGCGCGATACGACAGATTATCGCCAGTTCTGGGAGGATCTGCGCGCCGGCAAGTTCCAG
CGGTCCGAATTCCGCCGGCTGGCGAAGGGCGGGCGGGAGATCTGGATCCAGGCTTCCTACAACCCGGTCATCTCCTCCGG
GGGAGAGGTGCGCCGCATCATCAAGGTGGCGACCGACATCACAGGCCAGAAGACGCACAACGCTGATCTTCAAGGACAGA
TCGACGCCATCAATCGCGTGCAGGCGGTGATCCAGTTCGACCTTGACGGAACCATTCTCGACGCCAACGAGAATTTCCTG
AAGACCATGGGCTACACCCTCGCCGAGGTGCAGAGACGGCCACATGCCATCTTCATGGATCCGCAGGAGCGCGAGGCGCC
GTCCTATCGCGCCTTCTGGGACAGTCTGCGGGCCGGCACCTTCCAGCAGGCTGAGTTCCGTCGGTTGGCGAAGGGCGGGC
GGGAAGTCTGGATCCAGGCCTCGTACAACCCGATTTTCGACGCCAGCGGCCGTGTCTACAAGGTGGTGAAGTATGCCACC
GATATCACGGCGCAGGTGCAGGAGCGGATGCGCCGGGAGCGCCGCCGCTGCATCGACAAGGAACTCTCCGAGATCGCCGA
GGCCATCACCGCGGCCAACCATCAGGCGGCGGCCGCGGCCAGCGCCTCGACGCAGGCGTCCTCCGGCGTGCAGTCCGTCG
CCGCCGGCGCAGAGGAACTGGTGGCCTCCATTCATGAGATCGGCAGCCAGGTAAGCCGCGCGCTCGACGTTGCGAGCAAT
GCGGTGGGTCAAGCGGTGCGGACCAAGGAGATCGTGTCGGGGCTTGCCAGTGTGGCCCAGAAGATCGGCGCGGTTGTCGA
ATTGATCAATAGCATCGCCGGTCAGACCAACCTGCTGGCCCTCAACGCCACCATCGAGGCGGCGCGTGCGGGCGAGAGCG
GCAAGGGCTTTGCGGTGGTCGCTTCGGAGGTGAAAAATCTCGCGTCGCAGACGGCGAGGGCGACCGAGGAGATCACCGGC
CAGATCATCGCTGTCCAGGCGTCCACCTCGGATGCGGTCGGTGCGATCGCGGGGATCACCGAGACCATTTCCGAGATCAA
CGACATCTCCAGCGGCATCGCGGCGGCGGTGCAGCAGCAGTCGGCGGTCACCAGCGAAATCTCGCGGAGCATGCATGCGG
CGGCGGGGGGCGTGGGAGAGATCACCCGCAATCTCACCTCCCTCTCCAGCGCCACGGCCCAGATCGATGCCGCCAACCGC
AAGGTCCTGGAGGCGCAGCGGGAGGTGGCCTGA

Upstream 100 bases:

>100_bases
CAGATTCTCGCAATGCGCAAGCCTCGCGCAACCCATGTCTAAATCTAAAGTTGTATGATGTCTGAGATGTAGATTTTCAA
TTGTGAGCAATCATTGAGGC

Downstream 100 bases:

>100_bases
TCCGCCCCTGTCGACAATGATCCGGCATGGGGTTGAAGGCGTCGCCGCCGCCTCCTAAACCTCGCCCCATGTCGCTCCCA
ACTGCTTCGCACGCCGGTTT

Product: methyl-accepting chemotaxis receptor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MHMFSSQADAKLAAIQKSQAIIEFEPDGTIISANPNFLSAMGYTLAEIRGKHHSLFMPPEERDTTDYRQFWEDLRAGKFQ
RSEFRRLAKGGREIWIQASYNPVISSGGEVRRIIKVATDITGQKTHNADLQGQIDAINRVQAVIQFDLDGTILDANENFL
KTMGYTLAEVQRRPHAIFMDPQEREAPSYRAFWDSLRAGTFQQAEFRRLAKGGREVWIQASYNPIFDASGRVYKVVKYAT
DITAQVQERMRRERRRCIDKELSEIAEAITAANHQAAAAASASTQASSGVQSVAAGAEELVASIHEIGSQVSRALDVASN
AVGQAVRTKEIVSGLASVAQKIGAVVELINSIAGQTNLLALNATIEAARAGESGKGFAVVASEVKNLASQTARATEEITG
QIIAVQASTSDAVGAIAGITETISEINDISSGIAAAVQQQSAVTSEISRSMHAAAGGVGEITRNLTSLSSATAQIDAANR
KVLEAQREVA

Sequences:

>Translated_490_residues
MHMFSSQADAKLAAIQKSQAIIEFEPDGTIISANPNFLSAMGYTLAEIRGKHHSLFMPPEERDTTDYRQFWEDLRAGKFQ
RSEFRRLAKGGREIWIQASYNPVISSGGEVRRIIKVATDITGQKTHNADLQGQIDAINRVQAVIQFDLDGTILDANENFL
KTMGYTLAEVQRRPHAIFMDPQEREAPSYRAFWDSLRAGTFQQAEFRRLAKGGREVWIQASYNPIFDASGRVYKVVKYAT
DITAQVQERMRRERRRCIDKELSEIAEAITAANHQAAAAASASTQASSGVQSVAAGAEELVASIHEIGSQVSRALDVASN
AVGQAVRTKEIVSGLASVAQKIGAVVELINSIAGQTNLLALNATIEAARAGESGKGFAVVASEVKNLASQTARATEEITG
QIIAVQASTSDAVGAIAGITETISEINDISSGIAAAVQQQSAVTSEISRSMHAAAGGVGEITRNLTSLSSATAQIDAANR
KVLEAQREVA
>Mature_490_residues
MHMFSSQADAKLAAIQKSQAIIEFEPDGTIISANPNFLSAMGYTLAEIRGKHHSLFMPPEERDTTDYRQFWEDLRAGKFQ
RSEFRRLAKGGREIWIQASYNPVISSGGEVRRIIKVATDITGQKTHNADLQGQIDAINRVQAVIQFDLDGTILDANENFL
KTMGYTLAEVQRRPHAIFMDPQEREAPSYRAFWDSLRAGTFQQAEFRRLAKGGREVWIQASYNPIFDASGRVYKVVKYAT
DITAQVQERMRRERRRCIDKELSEIAEAITAANHQAAAAASASTQASSGVQSVAAGAEELVASIHEIGSQVSRALDVASN
AVGQAVRTKEIVSGLASVAQKIGAVVELINSIAGQTNLLALNATIEAARAGESGKGFAVVASEVKNLASQTARATEEITG
QIIAVQASTSDAVGAIAGITETISEINDISSGIAAAVQQQSAVTSEISRSMHAAAGGVGEITRNLTSLSSATAQIDAANR
KVLEAQREVA

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=170, Percent_Identity=40.5882352941176, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=211, Percent_Identity=33.6492890995261, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787690, Length=216, Percent_Identity=35.1851851851852, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI2367378, Length=176, Percent_Identity=35.2272727272727, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=199, Percent_Identity=35.678391959799, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 52677; Mature: 52677

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMFSSQADAKLAAIQKSQAIIEFEPDGTIISANPNFLSAMGYTLAEIRGKHHSLFMPPE
CCCCCCCCCHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCEECCCC
ERDTTDYRQFWEDLRAGKFQRSEFRRLAKGGREIWIQASYNPVISSGGEVRRIIKVATDI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCC
TGQKTHNADLQGQIDAINRVQAVIQFDLDGTILDANENFLKTMGYTLAEVQRRPHAIFMD
CCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEC
PQEREAPSYRAFWDSLRAGTFQQAEFRRLAKGGREVWIQASYNPIFDASGRVYKVVKYAT
CHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHHH
DITAQVQERMRRERRRCIDKELSEIAEAITAANHQAAAAASASTQASSGVQSVAAGAEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHH
VASIHEIGSQVSRALDVASNAVGQAVRTKEIVSGLASVAQKIGAVVELINSIAGQTNLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LNATIEAARAGESGKGFAVVASEVKNLASQTARATEEITGQIIAVQASTSDAVGAIAGIT
EECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHH
ETISEINDISSGIAAAVQQQSAVTSEISRSMHAAAGGVGEITRNLTSLSSATAQIDAANR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KVLEAQREVA
HHHHHHHHCC
>Mature Secondary Structure
MHMFSSQADAKLAAIQKSQAIIEFEPDGTIISANPNFLSAMGYTLAEIRGKHHSLFMPPE
CCCCCCCCCHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCEECCCC
ERDTTDYRQFWEDLRAGKFQRSEFRRLAKGGREIWIQASYNPVISSGGEVRRIIKVATDI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCC
TGQKTHNADLQGQIDAINRVQAVIQFDLDGTILDANENFLKTMGYTLAEVQRRPHAIFMD
CCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEC
PQEREAPSYRAFWDSLRAGTFQQAEFRRLAKGGREVWIQASYNPIFDASGRVYKVVKYAT
CHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHHH
DITAQVQERMRRERRRCIDKELSEIAEAITAANHQAAAAASASTQASSGVQSVAAGAEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHH
VASIHEIGSQVSRALDVASNAVGQAVRTKEIVSGLASVAQKIGAVVELINSIAGQTNLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LNATIEAARAGESGKGFAVVASEVKNLASQTARATEEITGQIIAVQASTSDAVGAIAGIT
EECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHH
ETISEINDISSGIAAAVQQQSAVTSEISRSMHAAAGGVGEITRNLTSLSSATAQIDAANR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KVLEAQREVA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]