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The map label for this gene is erfK [H]

Identifier: 158422635

GI number: 158422635

Start: 1134907

End: 1135569

Strand: Reverse

Name: erfK [H]

Synonym: AZC_1011

Alternate gene names: 158422635

Gene position: 1135569-1134907 (Counterclockwise)

Preceding gene: 158422636

Following gene: 158422634

Centisome position: 21.15

GC content: 66.82

Gene sequence:

>663_bases
ATGACCCGCGATCTGTTCCCGCCGCCCGCTGCGTTGAGCCGGCGTGCCTTGGTGCTTGGCACTCCGCTGCTTCTGGCGGC
CTGCGTCACGAACTCCCCGCCTCCCGTTGTGCAGACCCTCGGCGACCCGCGCTATGGCGAGGTGGTCGGCGAGCCCTTCG
AGGTGCCGGCGGTGGATACGTCCGGCCTCGACCCGCGCCTGCTGCGTCAGGTGGTGGACTATCCGAGCAAGTACCCGGTC
GGCACCATCGTGGTGGACGTGCCCAACCGCTACCTCTACCTCGTGGAGAAGGACGGCAAGGCCATCCGCTACGGCGTGGG
CGTTGGCAAGCAGGGCTACAGCTATCGCGGATGGGCGACCATCAAGCGCAAGGAAAAGTGGCCGCACTGGACGCCGACCC
CGAACATGATCGCCAAGCAGCCTGAGCGCTACAAGCCGTATGCCGCCGGCCTGCCGGGTGGCGAGACCAATCCGCTCGGC
CCGCGTGCGCTCTATCTCTATGACGGCGACCGGGACACCATGTTCCGCCTGCACGGCACCATCGAGCCCGACACCATCGG
CACCGAGGTCTCCTCCGGCTGCATCCGCCTGCTGAACCAGGACATCATCGACCTTTACGAGCGCGTGCCGCTGGGCACCC
GCGTGATCGTCATCAACAACTGA

Upstream 100 bases:

>100_bases
AAAATGGCGGCTTTTCGGACGGGTGTTGCCGCTGTGCAACCAGCCCCGGAAACCCGCGTGCTAGAAGGCGAATCAGACCT
CTCCACCGTCTTGGGGAATC

Downstream 100 bases:

>100_bases
TCCTGACGGCGCCGGCTTCGGCGCCGTTTTTCTTTGCCTTCAAGGCTTTGCCGGGCGGGGTTGACCTCGTGCGCGCGCGG
GCGCACACACGGGGCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTRDLFPPPAALSRRALVLGTPLLLAACVTNSPPPVVQTLGDPRYGEVVGEPFEVPAVDTSGLDPRLLRQVVDYPSKYPV
GTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWATIKRKEKWPHWTPTPNMIAKQPERYKPYAAGLPGGETNPLG
PRALYLYDGDRDTMFRLHGTIEPDTIGTEVSSGCIRLLNQDIIDLYERVPLGTRVIVINN

Sequences:

>Translated_220_residues
MTRDLFPPPAALSRRALVLGTPLLLAACVTNSPPPVVQTLGDPRYGEVVGEPFEVPAVDTSGLDPRLLRQVVDYPSKYPV
GTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWATIKRKEKWPHWTPTPNMIAKQPERYKPYAAGLPGGETNPLG
PRALYLYDGDRDTMFRLHGTIEPDTIGTEVSSGCIRLLNQDIIDLYERVPLGTRVIVINN
>Mature_219_residues
TRDLFPPPAALSRRALVLGTPLLLAACVTNSPPPVVQTLGDPRYGEVVGEPFEVPAVDTSGLDPRLLRQVVDYPSKYPVG
TIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWATIKRKEKWPHWTPTPNMIAKQPERYKPYAAGLPGGETNPLGP
RALYLYDGDRDTMFRLHGTIEPDTIGTEVSSGCIRLLNQDIIDLYERVPLGTRVIVINN

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=141, Percent_Identity=38.2978723404255, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787040, Length=152, Percent_Identity=34.8684210526316, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787968, Length=139, Percent_Identity=36.6906474820144, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787356, Length=143, Percent_Identity=34.965034965035, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24373; Mature: 24242

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDLFPPPAALSRRALVLGTPLLLAACVTNSPPPVVQTLGDPRYGEVVGEPFEVPAVDT
CCCCCCCCCHHHCCCEEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCC
SGLDPRLLRQVVDYPSKYPVGTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWAT
CCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEE
IKRKEKWPHWTPTPNMIAKQPERYKPYAAGLPGGETNPLGPRALYLYDGDRDTMFRLHGT
EEECCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
IEPDTIGTEVSSGCIRLLNQDIIDLYERVPLGTRVIVINN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
TRDLFPPPAALSRRALVLGTPLLLAACVTNSPPPVVQTLGDPRYGEVVGEPFEVPAVDT
CCCCCCCCHHHCCCEEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCC
SGLDPRLLRQVVDYPSKYPVGTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQGYSYRGWAT
CCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEE
IKRKEKWPHWTPTPNMIAKQPERYKPYAAGLPGGETNPLGPRALYLYDGDRDTMFRLHGT
EEECCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
IEPDTIGTEVSSGCIRLLNQDIIDLYERVPLGTRVIVINN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]