| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yyaJ [H]
Identifier: 158422392
GI number: 158422392
Start: 868265
End: 869671
Strand: Reverse
Name: yyaJ [H]
Synonym: AZC_0768
Alternate gene names: 158422392
Gene position: 869671-868265 (Counterclockwise)
Preceding gene: 158422393
Following gene: 158422388
Centisome position: 16.2
GC content: 65.67
Gene sequence:
>1407_bases ATGTCGACGCCAGCCTCTGCCGCGCCCCACGCGGCCACCCCCCTAGATCCAGCCTTCGACGGTCAGGCGGATATCAGCGC CCGTATCGAACGCCTGCCGATGACCCGCAAGGTCTTCTGGACGCGCAACATCATCGGCGCGGCCACCTTCTTCGATGGCT ACACCGTCATTGCCATCGCCTATGCCATGCCTGTTCTGGTGAAGGAGTGGGGGCTCTCGCCGCAGGAAATCGGCATGATC CTCTCTCTCGGCTACATCGGCCAGTTGGTGGGGGCGATCTTCTTCGGCTGGCTCGCGGAGCGGATTGGCCGGCTTCATGT GCTTCTGCTCACCATCCTGCTGTTCGTCAGCATGGACATCGCCTGCCTCACCGCATGGAGCGCCACCTCCATGATCGTGT TCCGCTTCCTGCAGGGCATCGGAACCGGCGGCGAGGTGCCGGTGGCATCGGCTTACATCAACGAATATGTCGGAGCGCGG ACGCGCGGGCGGTTCTTCCTGCTCTATGAGGTCATGTTCCTGCTCGGCCTCGTGGGCGCGGGAGTCATCGGCTATTTCCT TGTGCCGGTTTACGGTTGGCGGGCTATGTTCATCGTCGGGCTCGTGCCATCGGTGCTCATGATCCCGCTGCGCTGGTTCC TGTCCGAATCCCCGCGCTGGCTGGCCTCCCGTGGCCGCTATGCGGAGGCGGACCGCATCGTGTCCGATCTGGAGCGCAGC GCCACCGCTGCCGGCCATGTGCTGGAAGAGCCCCGCCCCCTCGCGCTGCGCCCCGCGCAGGTCGGAAAGGGCGACTGGCG GGAGCTGTTCCGAGGCATCTACCTGAAGCGCACGCTCATGATCTGGCCCCTGTGGTTCGCCACCCATGTGGTCAACAACG GCATGGCCACGTGGCTGCCGACACTCTACCGGCAGGTGTTCAACCTGCCCCTCTCCACCAGCCTCGCCTACGGCTTCACC ACATCGGGAGCCGGCGTCGTGGGCGCGCTCACCTGCGCCATGTTCATCGACAGGGTGGGCCGCAAGCGCTGGTACACATA CGCCCTGCTTCTTGCCGCCGTGCCGTTGGGCCTGCTCGGCTGGCTGGGCGCCACATCGGCCACGCAGGTGCTGTTCTTCG CCGCCATCACCTACGCCATCACCCAGAGCGTCACCTTCTCGCTCTATCTCTATTCGGCGGAGCTGTATCCGACCCGCATC CGCGCCATCGCCACCGGCTTCGGCAGCGCATGGCTGCGGCTTGGGTCATCGGCGGGTCCGCTGGTGGTGGGCGCGGTGCT CTCGGGCCTCGGCGGCATCCAGTGGGTGTTCGTCATCTTCTCGGCGCTGATCCTGGTGACCGGCGCATTCGTCGGCGCCT TCGCCGTGGAGACCAAGGGGCGCGTTCTCGAGGAGCTTTCTCCTTAA
Upstream 100 bases:
>100_bases GCCGGACGTGAAGGCCGGCGCGCGCCCGCTTCTCCCCATTCCGTCCGCCGGGGCCCTTCAAGGCAGCGCCGGCCAATAAA CAACTCTGCAGGAGCGAGGA
Downstream 100 bases:
>100_bases ACCGCACGGGGTGAACGAGGCTCCCACGTAAAAGGAAAGCCGGGACGGCGCTGACCGTCCCGGCTTTTTATGTCTTGCGG TCGAATTGGTAGCCGCGATG
Product: MFS transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSTPASAAPHAATPLDPAFDGQADISARIERLPMTRKVFWTRNIIGAATFFDGYTVIAIAYAMPVLVKEWGLSPQEIGMI LSLGYIGQLVGAIFFGWLAERIGRLHVLLLTILLFVSMDIACLTAWSATSMIVFRFLQGIGTGGEVPVASAYINEYVGAR TRGRFFLLYEVMFLLGLVGAGVIGYFLVPVYGWRAMFIVGLVPSVLMIPLRWFLSESPRWLASRGRYAEADRIVSDLERS ATAAGHVLEEPRPLALRPAQVGKGDWRELFRGIYLKRTLMIWPLWFATHVVNNGMATWLPTLYRQVFNLPLSTSLAYGFT TSGAGVVGALTCAMFIDRVGRKRWYTYALLLAAVPLGLLGWLGATSATQVLFFAAITYAITQSVTFSLYLYSAELYPTRI RAIATGFGSAWLRLGSSAGPLVVGAVLSGLGGIQWVFVIFSALILVTGAFVGAFAVETKGRVLEELSP
Sequences:
>Translated_468_residues MSTPASAAPHAATPLDPAFDGQADISARIERLPMTRKVFWTRNIIGAATFFDGYTVIAIAYAMPVLVKEWGLSPQEIGMI LSLGYIGQLVGAIFFGWLAERIGRLHVLLLTILLFVSMDIACLTAWSATSMIVFRFLQGIGTGGEVPVASAYINEYVGAR TRGRFFLLYEVMFLLGLVGAGVIGYFLVPVYGWRAMFIVGLVPSVLMIPLRWFLSESPRWLASRGRYAEADRIVSDLERS ATAAGHVLEEPRPLALRPAQVGKGDWRELFRGIYLKRTLMIWPLWFATHVVNNGMATWLPTLYRQVFNLPLSTSLAYGFT TSGAGVVGALTCAMFIDRVGRKRWYTYALLLAAVPLGLLGWLGATSATQVLFFAAITYAITQSVTFSLYLYSAELYPTRI RAIATGFGSAWLRLGSSAGPLVVGAVLSGLGGIQWVFVIFSALILVTGAFVGAFAVETKGRVLEELSP >Mature_467_residues STPASAAPHAATPLDPAFDGQADISARIERLPMTRKVFWTRNIIGAATFFDGYTVIAIAYAMPVLVKEWGLSPQEIGMIL SLGYIGQLVGAIFFGWLAERIGRLHVLLLTILLFVSMDIACLTAWSATSMIVFRFLQGIGTGGEVPVASAYINEYVGART RGRFFLLYEVMFLLGLVGAGVIGYFLVPVYGWRAMFIVGLVPSVLMIPLRWFLSESPRWLASRGRYAEADRIVSDLERSA TAAGHVLEEPRPLALRPAQVGKGDWRELFRGIYLKRTLMIWPLWFATHVVNNGMATWLPTLYRQVFNLPLSTSLAYGFTT SGAGVVGALTCAMFIDRVGRKRWYTYALLLAAVPLGLLGWLGATSATQVLFFAAITYAITQSVTFSLYLYSAELYPTRIR AIATGFGSAWLRLGSSAGPLVVGAVLSGLGGIQWVFVIFSALILVTGAFVGAFAVETKGRVLEELSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI213021148, Length=450, Percent_Identity=24.4444444444444, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI24308167, Length=456, Percent_Identity=26.3157894736842, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI31542327, Length=383, Percent_Identity=27.4151436031332, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI11415038, Length=412, Percent_Identity=26.4563106796117, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI7662270, Length=343, Percent_Identity=24.7813411078717, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI4506999, Length=409, Percent_Identity=26.8948655256724, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI166064021, Length=382, Percent_Identity=27.7486910994764, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI24497490, Length=400, Percent_Identity=26.75, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI4507005, Length=393, Percent_Identity=25.4452926208651, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI166197673, Length=384, Percent_Identity=28.6458333333333, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI302148518, Length=348, Percent_Identity=25.8620689655172, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI23510410, Length=334, Percent_Identity=26.9461077844311, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI216548223, Length=305, Percent_Identity=23.6065573770492, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI20070188, Length=374, Percent_Identity=28.8770053475936, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI24497476, Length=374, Percent_Identity=28.8770053475936, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI33457322, Length=338, Percent_Identity=23.9644970414201, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI262399383, Length=265, Percent_Identity=25.6603773584906, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI24497478, Length=355, Percent_Identity=28.169014084507, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI24497480, Length=354, Percent_Identity=27.9661016949153, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI24497497, Length=376, Percent_Identity=23.936170212766, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI90669191, Length=371, Percent_Identity=23.1805929919137, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI73695465, Length=202, Percent_Identity=28.2178217821782, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI296080721, Length=376, Percent_Identity=26.3297872340426, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI296080719, Length=376, Percent_Identity=26.3297872340426, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI24497499, Length=376, Percent_Identity=26.3297872340426, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI21553331, Length=340, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI1788068, Length=465, Percent_Identity=25.8064516129032, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI87082159, Length=400, Percent_Identity=27.25, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786229, Length=420, Percent_Identity=24.7619047619048, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1789207, Length=307, Percent_Identity=27.6872964169381, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1788074, Length=398, Percent_Identity=26.8844221105528, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789312, Length=312, Percent_Identity=25.9615384615385, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87081723, Length=364, Percent_Identity=28.2967032967033, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082231, Length=188, Percent_Identity=27.1276595744681, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790463, Length=442, Percent_Identity=22.8506787330317, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI87082404, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32564663, Length=425, Percent_Identity=22.5882352941176, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71996338, Length=430, Percent_Identity=26.046511627907, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565978, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71986689, Length=344, Percent_Identity=22.9651162790698, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193202825, Length=344, Percent_Identity=22.9651162790698, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI133900837, Length=378, Percent_Identity=26.7195767195767, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72003720, Length=389, Percent_Identity=26.7352185089974, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988651, Length=202, Percent_Identity=27.7227722772277, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565976, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193209133, Length=416, Percent_Identity=22.5961538461538, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560496, Length=433, Percent_Identity=23.7875288683603, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6323653, Length=440, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI19922616, Length=447, Percent_Identity=28.1879194630872, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI62484254, Length=388, Percent_Identity=25.2577319587629, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24640198, Length=451, Percent_Identity=21.9512195121951, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24640196, Length=451, Percent_Identity=21.9512195121951, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24640200, Length=451, Percent_Identity=21.9512195121951, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24649622, Length=415, Percent_Identity=26.0240963855422, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI221330907, Length=392, Percent_Identity=25.5102040816327, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24668456, Length=404, Percent_Identity=25, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21355657, Length=352, Percent_Identity=27.8409090909091, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI19922874, Length=380, Percent_Identity=22.1052631578947, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24649618, Length=356, Percent_Identity=25.8426966292135, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI45549297, Length=498, Percent_Identity=23.2931726907631, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24649616, Length=368, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24648211, Length=346, Percent_Identity=25.7225433526012, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922134, Length=430, Percent_Identity=25.8139534883721, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51070; Mature: 50939
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPASAAPHAATPLDPAFDGQADISARIERLPMTRKVFWTRNIIGAATFFDGYTVIAIA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH YAMPVLVKEWGLSPQEIGMILSLGYIGQLVGAIFFGWLAERIGRLHVLLLTILLFVSMDI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLTAWSATSMIVFRFLQGIGTGGEVPVASAYINEYVGARTRGRFFLLYEVMFLLGLVGA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GVIGYFLVPVYGWRAMFIVGLVPSVLMIPLRWFLSESPRWLASRGRYAEADRIVSDLERS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH ATAAGHVLEEPRPLALRPAQVGKGDWRELFRGIYLKRTLMIWPLWFATHVVNNGMATWLP HHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TLYRQVFNLPLSTSLAYGFTTSGAGVVGALTCAMFIDRVGRKRWYTYALLLAAVPLGLLG HHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLGATSATQVLFFAAITYAITQSVTFSLYLYSAELYPTRIRAIATGFGSAWLRLGSSAGP HHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCH LVVGAVLSGLGGIQWVFVIFSALILVTGAFVGAFAVETKGRVLEELSP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STPASAAPHAATPLDPAFDGQADISARIERLPMTRKVFWTRNIIGAATFFDGYTVIAIA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH YAMPVLVKEWGLSPQEIGMILSLGYIGQLVGAIFFGWLAERIGRLHVLLLTILLFVSMDI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLTAWSATSMIVFRFLQGIGTGGEVPVASAYINEYVGARTRGRFFLLYEVMFLLGLVGA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GVIGYFLVPVYGWRAMFIVGLVPSVLMIPLRWFLSESPRWLASRGRYAEADRIVSDLERS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH ATAAGHVLEEPRPLALRPAQVGKGDWRELFRGIYLKRTLMIWPLWFATHVVNNGMATWLP HHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TLYRQVFNLPLSTSLAYGFTTSGAGVVGALTCAMFIDRVGRKRWYTYALLLAAVPLGLLG HHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLGATSATQVLFFAAITYAITQSVTFSLYLYSAELYPTRIRAIATGFGSAWLRLGSSAGP HHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCH LVVGAVLSGLGGIQWVFVIFSALILVTGAFVGAFAVETKGRVLEELSP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]