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The map label for this gene is yebC [C]

Identifier: 158422134

GI number: 158422134

Start: 567551

End: 568297

Strand: Direct

Name: yebC [C]

Synonym: AZC_0510

Alternate gene names: 158422134

Gene position: 567551-568297 (Clockwise)

Preceding gene: 158422133

Following gene: 158422136

Centisome position: 10.57

GC content: 64.93

Gene sequence:

>747_bases
ATGGCCGGACATTCACAATTCAAGAACATCATGCACCGCAAGGGACGGCAGGACGCGGTGCGTTCCAAGCTGTTCTCCAA
GCTGGCGCGCGAAATCACCGTGGCCGCCAAGATGGGCCTGCCCGATCCGAACATGAACGCGCGCCTGCGCGCCGCCATCC
TCGCGGCGCGCGCCGAGAACATGCCCAAGGACAACATCGAGCGCGCCATCAAGAAGGCGTCCGGTGCGGACATGGAGAAT
TATGACGAGATCCGTTACGAGGGCTACGGTCCCGGCGGCGTCGCCGTCATCGTCGAGGCGCTGACCGACAACCGCAACCG
CACCGCCTCCGAAGTGCGCTCCTATTTCACCAAGTCCGGCGGCAACCTCGCCGAGACGGGCGCGGTGTCCTTCATGTTCG
ACCGCCTCGGCGCCATCGAGTTCGATGCGGCCAAGGTGAATGCGGACGACCTGCTGGAAGCCGCCATCGAGGCGGGCGCG
GACGACGTGAACTCCTCCGAGGAGACGCACGAGGTGGTCTGCGCGGTGGAGAGCCTCGCGGAAGTGCAGAAGGCGCTGGA
AGCCAAGTTCGGCGAGCCGCGCAAGGCGGGCCTCGTGTGGCGGCCGCAGAACACCATCGCGGTGGATGACGAGACCGGCG
AGAAGCTGATGCGTCTCGTGGAGACGCTGGAAGACAACGATGACGTCCAGAACGTCACCGCCAATTTCGAGCTGTCCGAA
GCCCTGATGGCCAAGCTCAGCGCCTGA

Upstream 100 bases:

>100_bases
GACGGGCCGGCCCCCACGCTCCGGAGCGAGCGTGGCGCGGCGGCGCGACCCTGCTTCGGGCGCGCGGGCGTGAGAGAGTT
TCAAGGATCTGGAGGCGGCC

Downstream 100 bases:

>100_bases
GGCGTGGGAGGCGCTGCCTCCCTTTCCCGTTCGGAGACAAAAAAACCCGGCCACGCGGCCGGGTTTCTTTTTGGGCTGGT
GGAGTGTTCAGGCCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSQFKNIMHRKGRQDAVRSKLFSKLAREITVAAKMGLPDPNMNARLRAAILAARAENMPKDNIERAIKKASGADMEN
YDEIRYEGYGPGGVAVIVEALTDNRNRTASEVRSYFTKSGGNLAETGAVSFMFDRLGAIEFDAAKVNADDLLEAAIEAGA
DDVNSSEETHEVVCAVESLAEVQKALEAKFGEPRKAGLVWRPQNTIAVDDETGEKLMRLVETLEDNDDVQNVTANFELSE
ALMAKLSA

Sequences:

>Translated_248_residues
MAGHSQFKNIMHRKGRQDAVRSKLFSKLAREITVAAKMGLPDPNMNARLRAAILAARAENMPKDNIERAIKKASGADMEN
YDEIRYEGYGPGGVAVIVEALTDNRNRTASEVRSYFTKSGGNLAETGAVSFMFDRLGAIEFDAAKVNADDLLEAAIEAGA
DDVNSSEETHEVVCAVESLAEVQKALEAKFGEPRKAGLVWRPQNTIAVDDETGEKLMRLVETLEDNDDVQNVTANFELSE
ALMAKLSA
>Mature_247_residues
AGHSQFKNIMHRKGRQDAVRSKLFSKLAREITVAAKMGLPDPNMNARLRAAILAARAENMPKDNIERAIKKASGADMENY
DEIRYEGYGPGGVAVIVEALTDNRNRTASEVRSYFTKSGGNLAETGAVSFMFDRLGAIEFDAAKVNADDLLEAAIEAGAD
DVNSSEETHEVVCAVESLAEVQKALEAKFGEPRKAGLVWRPQNTIAVDDETGEKLMRLVETLEDNDDVQNVTANFELSEA
LMAKLSA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=5e-30,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=46.3709677419355, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=37.1794871794872, Blast_Score=143, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=27.8688524590164, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=34.9809885931559, Blast_Score=130, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=28.2868525896414, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y510_AZOC5 (A8IM90)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001523426.1
- ProteinModelPortal:   A8IM90
- SMR:   A8IM90
- GeneID:   5688023
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_0510
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   ACAU438753:AZC_0510-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27023; Mature: 26891

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGRQDAVRSKLFSKLAREITVAAKMGLPDPNMNARLRAAILAARAEN
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
MPKDNIERAIKKASGADMENYDEIRYEGYGPGGVAVIVEALTDNRNRTASEVRSYFTKSG
CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCC
GNLAETGAVSFMFDRLGAIEFDAAKVNADDLLEAAIEAGADDVNSSEETHEVVCAVESLA
CCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
EVQKALEAKFGEPRKAGLVWRPQNTIAVDDETGEKLMRLVETLEDNDDVQNVTANFELSE
HHHHHHHHHCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH
ALMAKLSA
HHHHHHCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGRQDAVRSKLFSKLAREITVAAKMGLPDPNMNARLRAAILAARAEN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
MPKDNIERAIKKASGADMENYDEIRYEGYGPGGVAVIVEALTDNRNRTASEVRSYFTKSG
CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCC
GNLAETGAVSFMFDRLGAIEFDAAKVNADDLLEAAIEAGADDVNSSEETHEVVCAVESLA
CCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
EVQKALEAKFGEPRKAGLVWRPQNTIAVDDETGEKLMRLVETLEDNDDVQNVTANFELSE
HHHHHHHHHCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH
ALMAKLSA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA