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The map label for this gene is ytgB_2

Identifier: 15836518

GI number: 15836518

Start: 1133921

End: 1134523

Strand: Direct

Name: ytgB_2

Synonym: CPj0987

Alternate gene names: 15836518

Gene position: 1133921-1134523 (Clockwise)

Preceding gene: 15836517

Following gene: 15836521

Centisome position: 92.45

GC content: 42.45

Gene sequence:

>603_bases
ATGTTTGCATATCGTACCCTGCTTACACATAATGTAGTCCAGGTATCACACGAAATTTTTAAAACCACAGTTGTTCCCGG
AGATACAGTCATTGATGCGACCTGCGGAAACGGTAACGACAGCCTTTTTTTAGCGCGCTTGCTTCAAGGAGAGGGAAGAC
TTGTTGTCTACGATATCCAAAAAGAAGCGTTGTCCAATGCTTTACTATTGTTTGAAACACACTTGTCAGAGCAAGAAAGA
AGTGTTATCGAAATGAAAGAGCAGTCGCACGAGCATATTTTAGAGAAAGATGTGAAGCTCATTCACTACAACTTGGGCTA
TCTTCCGAAAGGGAATAAAGAAATCACCACATTGGCAAGAACTACAGAAATAAGCTTAGAATATGCTTTAAACATAGTCC
GCCCCGATGGACTCATTACTGTCGTATGCTATCCAGGGCATCCAGAAGGAGAAAAGGAAACACATAGTGTCGAGAGCCTA
GCACAACGGTTACATCCTAAGGAATGGTGCGTGAGCTCATTTTATGTAGCGAATCGGTGTCGAGCCCCTAGACTTTTTAT
TTTTCAGAGACAGGGGAGTGAATCTTCGGTTGATAAGGGATAA

Upstream 100 bases:

>100_bases
CCTTCACGATGTCAACGTGACGCTCTAACCAACTGAGCTAATACCCCGAGTTCAGCTACTATCCTAACTAGAAAATGGTA
TCTTTGCAATAGGCTTCTTC

Downstream 100 bases:

>100_bases
TGCGAATCTCGTGTTCCAGATCAATGCCTTGCGTTTTTAACGTTGATTGGATGATAGCTATGAGTTGCTTGACCTCATCA
GAAGTGGCCTTGCCAGTATT

Product: rRNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFAYRTLLTHNVVQVSHEIFKTTVVPGDTVIDATCGNGNDSLFLARLLQGEGRLVVYDIQKEALSNALLLFETHLSEQER
SVIEMKEQSHEHILEKDVKLIHYNLGYLPKGNKEITTLARTTEISLEYALNIVRPDGLITVVCYPGHPEGEKETHSVESL
AQRLHPKEWCVSSFYVANRCRAPRLFIFQRQGSESSVDKG

Sequences:

>Translated_200_residues
MFAYRTLLTHNVVQVSHEIFKTTVVPGDTVIDATCGNGNDSLFLARLLQGEGRLVVYDIQKEALSNALLLFETHLSEQER
SVIEMKEQSHEHILEKDVKLIHYNLGYLPKGNKEITTLARTTEISLEYALNIVRPDGLITVVCYPGHPEGEKETHSVESL
AQRLHPKEWCVSSFYVANRCRAPRLFIFQRQGSESSVDKG
>Mature_200_residues
MFAYRTLLTHNVVQVSHEIFKTTVVPGDTVIDATCGNGNDSLFLARLLQGEGRLVVYDIQKEALSNALLLFETHLSEQER
SVIEMKEQSHEHILEKDVKLIHYNLGYLPKGNKEITTLARTTEISLEYALNIVRPDGLITVVCYPGHPEGEKETHSVESL
AQRLHPKEWCVSSFYVANRCRAPRLFIFQRQGSESSVDKG

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 22624; Mature: 22624

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAYRTLLTHNVVQVSHEIFKTTVVPGDTVIDATCGNGNDSLFLARLLQGEGRLVVYDIQ
CCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
KEALSNALLLFETHLSEQERSVIEMKEQSHEHILEKDVKLIHYNLGYLPKGNKEITTLAR
HHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEH
TTEISLEYALNIVRPDGLITVVCYPGHPEGEKETHSVESLAQRLHPKEWCVSSFYVANRC
HHEEEEEHEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RAPRLFIFQRQGSESSVDKG
CCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MFAYRTLLTHNVVQVSHEIFKTTVVPGDTVIDATCGNGNDSLFLARLLQGEGRLVVYDIQ
CCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
KEALSNALLLFETHLSEQERSVIEMKEQSHEHILEKDVKLIHYNLGYLPKGNKEITTLAR
HHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEH
TTEISLEYALNIVRPDGLITVVCYPGHPEGEKETHSVESLAQRLHPKEWCVSSFYVANRC
HHEEEEEHEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RAPRLFIFQRQGSESSVDKG
CCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]