| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is gltX
Identifier: 15836091
GI number: 15836091
Start: 643416
End: 644933
Strand: Reverse
Name: gltX
Synonym: CPj0560
Alternate gene names: 15836091
Gene position: 644933-643416 (Counterclockwise)
Preceding gene: 15836092
Following gene: 15836089
Centisome position: 52.58
GC content: 45.52
Gene sequence:
>1518_bases ATGAATTGGGAAAATGTCCGTGTTAGGGTAGCTCCTTCACCTACAGGAGATCCTCATGTAGGTACCGCCTATATGGCTCT GTTTAATGAAATCTTTGCAAAACGATTTAAAGGGAAAATGATCCTCCGTATCGAAGATACGGATAGAACACGTAGTCGCC AAGATTACGAAGAAAATATTTTCTCAGCTCTTCGTTGGTGCGGGATCCAATGGGATGAGGGCCCTGATGTAGGCGGCCCC TATGGCCCCTATCGTCAGTCAGAACGCACGAAAATCTATCAAGGGTATGTTGAGACACTTTTAAAGACAGATTGCGCTTA TAAGTGCTTTGCAACCCCTCAAGAACTCGCAGAAATGCGCGCTGTGGCAAGTACCCTCGGTTATCGTGGGGGATACGATC GCAGGTACAGGTACCTCTCTCCCGAAGAGGTAGCCTCACGAGAGGCAGCAGGTCAGCCCTACACCATTCGTCTTAAAGTT CCCTTATCAGGGGAATGTGTTTTCGAAGATTATAGCAAGGGAAGAGTCGTGTTTCCTTGGGCAGATGTCGATGATCAGGT CCTAGTAAAATCTGACGGATTCCCCACGTACCACTTTGCTAATGTAATTGACGACCACCTCATGGGCATCACTCACGTCC TCAGAGGGGAAGAGTGGCTAAGTTCAACTCCTAAGCATCTCCTACTCTACGAAGCTTTTGGCTGGGAGCCTCCCGTCTTT CTCCATATGCCCCTGCTTCTAAACCCCGATGGAACAAAACTTTCAAAAAGAAAGAACCCTACCTCGATTTTTTATTACCG CGACTCAGGTTATGTCAAAGAAGCCTTTGTGAACTTCCTGACTCTCATGGGTTACAGTATGGAAGGGGATGAAGAAGTCT ATTCTCTAGAGCGTATTATAGAAACTTTTAATCCTCGACGTATTGGAAAGTCAGGAGCAGTTTTTGATATTCAAAAGCTC GACTGGATGAATAAGCATTACCTCAACCACGAGGGTTCGCCAGAGTGCTTGTTAAAAGAACTCCAGGGTTGGCTACTTAA TGACGAATTTTTCTTAAAAATCCTTCCCCTCTGTCAATCTCGGATTACAACTCTTGCGGAGTTTATCAACCTCACCTCGT TCTTTTTCTCAGGATTGTTAGAGTACCGTGTTGAGGAACTCCTACCACAGGCCCTTTCTCCAGAGAAAGCAGCTATCCTT CTCTATAGCTATGTCAAATATCTTGAGAAAACCGATCAATGGACGAAAGAGACGTGTTACCTCGGATCTAAATGGTTAGC TCAAGCATTCAATGTCCACCATAAAAAAGCCATCATCCCACTGCTTTATGTGGCAATTACTGGGAAAAAGCAGGGGCTCC CTCTCTTTGACTCTATAGAGATTTTAGGGAAACCTCGAGCGAGAGCACGTCTTGTGTATGCAGAAAAGCTTTTAGGAGGC GTTCCTAAGAAGCTCGCTGCAACTGTGGATAAGTTCATGCAACGAGAAGACTTCGAAGAGGCTACTTTCGATCTCTAA
Upstream 100 bases:
>100_bases TTTTATTTTTGGATTTATGCATTTCTGCAGAGAGGATTTCCCTTGAAGAAATAGCCGTTTTCAGGGTATGAAGTCTCTCT GGTCTAAGGATAAAAGAATC
Downstream 100 bases:
>100_bases ATATCGGTCGCATGAATGTGCGTGGCTGCTAGCTAAGCGAAACAGCCACCGCGGTTTCTATTCATAACCACACTTCCTGT TTGAGTCGTTGCGAAGACAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MNWENVRVRVAPSPTGDPHVGTAYMALFNEIFAKRFKGKMILRIEDTDRTRSRQDYEENIFSALRWCGIQWDEGPDVGGP YGPYRQSERTKIYQGYVETLLKTDCAYKCFATPQELAEMRAVASTLGYRGGYDRRYRYLSPEEVASREAAGQPYTIRLKV PLSGECVFEDYSKGRVVFPWADVDDQVLVKSDGFPTYHFANVIDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPPVF LHMPLLLNPDGTKLSKRKNPTSIFYYRDSGYVKEAFVNFLTLMGYSMEGDEEVYSLERIIETFNPRRIGKSGAVFDIQKL DWMNKHYLNHEGSPECLLKELQGWLLNDEFFLKILPLCQSRITTLAEFINLTSFFFSGLLEYRVEELLPQALSPEKAAIL LYSYVKYLEKTDQWTKETCYLGSKWLAQAFNVHHKKAIIPLLYVAITGKKQGLPLFDSIEILGKPRARARLVYAEKLLGG VPKKLAATVDKFMQREDFEEATFDL
Sequences:
>Translated_505_residues MNWENVRVRVAPSPTGDPHVGTAYMALFNEIFAKRFKGKMILRIEDTDRTRSRQDYEENIFSALRWCGIQWDEGPDVGGP YGPYRQSERTKIYQGYVETLLKTDCAYKCFATPQELAEMRAVASTLGYRGGYDRRYRYLSPEEVASREAAGQPYTIRLKV PLSGECVFEDYSKGRVVFPWADVDDQVLVKSDGFPTYHFANVIDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPPVF LHMPLLLNPDGTKLSKRKNPTSIFYYRDSGYVKEAFVNFLTLMGYSMEGDEEVYSLERIIETFNPRRIGKSGAVFDIQKL DWMNKHYLNHEGSPECLLKELQGWLLNDEFFLKILPLCQSRITTLAEFINLTSFFFSGLLEYRVEELLPQALSPEKAAIL LYSYVKYLEKTDQWTKETCYLGSKWLAQAFNVHHKKAIIPLLYVAITGKKQGLPLFDSIEILGKPRARARLVYAEKLLGG VPKKLAATVDKFMQREDFEEATFDL >Mature_505_residues MNWENVRVRVAPSPTGDPHVGTAYMALFNEIFAKRFKGKMILRIEDTDRTRSRQDYEENIFSALRWCGIQWDEGPDVGGP YGPYRQSERTKIYQGYVETLLKTDCAYKCFATPQELAEMRAVASTLGYRGGYDRRYRYLSPEEVASREAAGQPYTIRLKV PLSGECVFEDYSKGRVVFPWADVDDQVLVKSDGFPTYHFANVIDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPPVF LHMPLLLNPDGTKLSKRKNPTSIFYYRDSGYVKEAFVNFLTLMGYSMEGDEEVYSLERIIETFNPRRIGKSGAVFDIQKL DWMNKHYLNHEGSPECLLKELQGWLLNDEFFLKILPLCQSRITTLAEFINLTSFFFSGLLEYRVEELLPQALSPEKAAIL LYSYVKYLEKTDQWTKETCYLGSKWLAQAFNVHHKKAIIPLLYVAITGKKQGLPLFDSIEILGKPRARARLVYAEKLLGG VPKKLAATVDKFMQREDFEEATFDL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=490, Percent_Identity=37.1428571428571, Blast_Score=289, Evalue=4e-78, Organism=Homo sapiens, GI62241042, Length=257, Percent_Identity=27.2373540856031, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788743, Length=481, Percent_Identity=33.2640332640333, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI226510925, Length=296, Percent_Identity=30.0675675675676, Blast_Score=123, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71993394, Length=484, Percent_Identity=33.4710743801653, Blast_Score=259, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324540, Length=494, Percent_Identity=36.6396761133603, Blast_Score=274, Evalue=3e-74, Organism=Drosophila melanogaster, GI24665321, Length=501, Percent_Identity=37.7245508982036, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI24649466, Length=271, Percent_Identity=27.3062730627306, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CHLPN (Q9Z7Z3)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: C72064 - PIR: D86560 - RefSeq: NP_224756.1 - RefSeq: NP_300615.1 - RefSeq: NP_444741.1 - RefSeq: NP_876854.1 - ProteinModelPortal: Q9Z7Z3 - SMR: Q9Z7Z3 - GeneID: 1467261 - GeneID: 895358 - GeneID: 919322 - GeneID: 962974 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0190 - KEGG: cpn:CPn0560 - KEGG: cpt:CpB0582 - TIGR: CP_0190 - HOGENOM: HBG628189 - OMA: NEIFAKR - PhylomeDB: Q9Z7Z3 - ProtClustDB: PRK01406 - BioCyc: CPNE115711:CP_0190-MONOMER - BioCyc: CPNE115713:CPN0560-MONOMER - BioCyc: CPNE138677:CPJ0560-MONOMER - BioCyc: CPNE182082:CPB0582-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 58206; Mature: 58206
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 256-256
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWENVRVRVAPSPTGDPHVGTAYMALFNEIFAKRFKGKMILRIEDTDRTRSRQDYEENI CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH FSALRWCGIQWDEGPDVGGPYGPYRQSERTKIYQGYVETLLKTDCAYKCFATPQELAEMR HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH AVASTLGYRGGYDRRYRYLSPEEVASREAAGQPYTIRLKVPLSGECVFEDYSKGRVVFPW HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEEEE ADVDDQVLVKSDGFPTYHFANVIDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPPVF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCEE LHMPLLLNPDGTKLSKRKNPTSIFYYRDSGYVKEAFVNFLTLMGYSMEGDEEVYSLERII EEECEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ETFNPRRIGKSGAVFDIQKLDWMNKHYLNHEGSPECLLKELQGWLLNDEFFLKILPLCQS HHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RITTLAEFINLTSFFFSGLLEYRVEELLPQALSPEKAAILLYSYVKYLEKTDQWTKETCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGSKWLAQAFNVHHKKAIIPLLYVAITGKKQGLPLFDSIEILGKPRARARLVYAEKLLGG CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC VPKKLAATVDKFMQREDFEEATFDL CCHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MNWENVRVRVAPSPTGDPHVGTAYMALFNEIFAKRFKGKMILRIEDTDRTRSRQDYEENI CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH FSALRWCGIQWDEGPDVGGPYGPYRQSERTKIYQGYVETLLKTDCAYKCFATPQELAEMR HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH AVASTLGYRGGYDRRYRYLSPEEVASREAAGQPYTIRLKVPLSGECVFEDYSKGRVVFPW HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEEEE ADVDDQVLVKSDGFPTYHFANVIDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPPVF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCEE LHMPLLLNPDGTKLSKRKNPTSIFYYRDSGYVKEAFVNFLTLMGYSMEGDEEVYSLERII EEECEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ETFNPRRIGKSGAVFDIQKLDWMNKHYLNHEGSPECLLKELQGWLLNDEFFLKILPLCQS HHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RITTLAEFINLTSFFFSGLLEYRVEELLPQALSPEKAAILLYSYVKYLEKTDQWTKETCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGSKWLAQAFNVHHKKAIIPLLYVAITGKKQGLPLFDSIEILGKPRARARLVYAEKLLGG CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC VPKKLAATVDKFMQREDFEEATFDL CCHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362