Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15836030

GI number: 15836030

Start: 578522

End: 579679

Strand: Reverse

Name: Not Available

Synonym: CPj0499

Alternate gene names: NA

Gene position: 579679-578522 (Counterclockwise)

Preceding gene: 15836047

Following gene: 15836029

Centisome position: 47.26

GC content: 46.2

Gene sequence:

>1158_bases
ATGTCGTCAGTAAATCAAAGCTCTGGAACCCCGAATCCAGAAGAGGTAACTTCTCCTGAATCTACGGAAGAAAACAAAAA
TGTTGTTTCTTCAGATGAGGCGCAAGCCACGCATGCTGTGGCTCTTCCTATAGTCACTCAACTTTCTCTTCCTGAAGGTG
TGGGGACCTCATCTGAAGAAACGGCGAGTAATCCGAAGGTAGACGAGATTGTAGCTGAAGTTTCTTCGAGTCGGGCGGTT
GCTGATCAGATCTCATCACTTGTAGAGCGTGTTGGAGAGCTTTTAGACGACCTTAAGGGTGCCCAGTCCCTTTTCACTAG
CTTTCAGTCAGAGTTGAAAAACTGTCTTCCGGCATGGAAATCTTCAACGAGAAGACTCGAAACTCGAGGTGCTGGGGATA
ATGCGGATATAGCGAGGCTGGAATTATTTCGTAGCGATTACGAGGCTGTCTTAGGCCATGCGAACCAGTTTCATGGGAAG
GCTCATCTCATTTTAAGTAAGTTAACAGATGTACATCACAAGCTACAGGGACTCAGTCGTGAAGATCTTTCCCTGGCGTT
TGACAATAATGATAGGGTTCTTGAGCATCTGGGTTCGTTAGGGCTTGATGTAGACGCTGAAGGTAATTGGTCTCTTTCTT
GTGAGAGGGGGATTCCGCGACTGGTGCTTACTGCTGACAGTATGCTTGTCCAGATCAAGAAAGTGAATCTACCTACTGTA
GAAGAATTGCGGACTCTTCAGGGAACAACGGAATCTTCGTCTGATCCTAGGGTTGAAGAAAGTTTGTCTTGCTGTGAAAG
ATTGCTCAATGAATTACGTCGTCTTTGGGCGAATTTTGTAGGTTTTATTTCGAGTTGCTATGACAACATCGTGTTTGTTT
TGATGTGGATAGTGAGACGGATTAACCTTTTGCCTGGGCTGGGGTGTTTGCCTTTCCATAATCCCGATGCTTCTCAAGAA
GACCAGAGGTCTTCTTCCGGAGAGCGTTCTACAAGGAGAGAACGCCTTTCTCGGCGATCTGACTTATCTGAGGAAGAGAT
GATTGTGAGAGCTGAGGGAGAGTCTATACATCCTGAATCTCCCCATGGAGATGGCCGTAACCAACCTAGTCGAGGTGATA
AGCAAGACTCTGATAGTGAGGAAGAGACGGAGTTATAA

Upstream 100 bases:

>100_bases
TTATTTTAATTATATTTTTGTTTTTATTTAGAAATTTAATAATCTCAACTTATAATTAAGTGTATACTTATTAATCTTTT
ATTTTTGTAATTGTAGTACT

Downstream 100 bases:

>100_bases
TAAAGAATGATCTCTTCTGAGTAGAAACTATCGAATCAGAATTGCCAGCTTTTACTCTCACCCAGTCCTATTTTTATAGT
TCAAATTGCGGTGGTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAV
ADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGK
AHLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV
EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQE
DQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL

Sequences:

>Translated_385_residues
MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAV
ADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGK
AHLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV
EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQE
DQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL
>Mature_384_residues
SSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAVA
DQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKA
HLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTVE
ELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQED
QRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0499/CT_392/TC_0671 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y499_CHLPN (Q9Z852)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   E72070
- PIR:   G86552
- PIR:   H81595
- RefSeq:   NP_224695.1
- RefSeq:   NP_300554.1
- RefSeq:   NP_444806.1
- RefSeq:   NP_876791.1
- GeneID:   1467198
- GeneID:   895443
- GeneID:   919244
- GeneID:   962912
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0255
- KEGG:   cpj:CPj0499
- KEGG:   cpn:CPn0499
- KEGG:   cpt:CpB0519
- TIGR:   CP_0255
- OMA:   SINQSIC
- ProtClustDB:   CLSK871353
- BioCyc:   CPNE115711:CP_0255-MONOMER
- BioCyc:   CPNE115713:CPN0499-MONOMER
- BioCyc:   CPNE138677:CPJ0499-MONOMER
- BioCyc:   CPNE182082:CPB0519-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42459; Mature: 42328

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEE
CCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
TASNPKVDEIVAEVSSSRAVADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKAHLILSKLTDVHHKLQGLSR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
EDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCHH
EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLLPGLGCLPFHNPDASQEDQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPES
HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCC
PHGDGRNQPSRGDKQDSDSEEETEL
CCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEE
CCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
TASNPKVDEIVAEVSSSRAVADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKAHLILSKLTDVHHKLQGLSR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
EDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCHH
EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLLPGLGCLPFHNPDASQEDQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPES
HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCC
PHGDGRNQPSRGDKQDSDSEEETEL
CCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362