| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15836030
GI number: 15836030
Start: 578522
End: 579679
Strand: Reverse
Name: Not Available
Synonym: CPj0499
Alternate gene names: NA
Gene position: 579679-578522 (Counterclockwise)
Preceding gene: 15836047
Following gene: 15836029
Centisome position: 47.26
GC content: 46.2
Gene sequence:
>1158_bases ATGTCGTCAGTAAATCAAAGCTCTGGAACCCCGAATCCAGAAGAGGTAACTTCTCCTGAATCTACGGAAGAAAACAAAAA TGTTGTTTCTTCAGATGAGGCGCAAGCCACGCATGCTGTGGCTCTTCCTATAGTCACTCAACTTTCTCTTCCTGAAGGTG TGGGGACCTCATCTGAAGAAACGGCGAGTAATCCGAAGGTAGACGAGATTGTAGCTGAAGTTTCTTCGAGTCGGGCGGTT GCTGATCAGATCTCATCACTTGTAGAGCGTGTTGGAGAGCTTTTAGACGACCTTAAGGGTGCCCAGTCCCTTTTCACTAG CTTTCAGTCAGAGTTGAAAAACTGTCTTCCGGCATGGAAATCTTCAACGAGAAGACTCGAAACTCGAGGTGCTGGGGATA ATGCGGATATAGCGAGGCTGGAATTATTTCGTAGCGATTACGAGGCTGTCTTAGGCCATGCGAACCAGTTTCATGGGAAG GCTCATCTCATTTTAAGTAAGTTAACAGATGTACATCACAAGCTACAGGGACTCAGTCGTGAAGATCTTTCCCTGGCGTT TGACAATAATGATAGGGTTCTTGAGCATCTGGGTTCGTTAGGGCTTGATGTAGACGCTGAAGGTAATTGGTCTCTTTCTT GTGAGAGGGGGATTCCGCGACTGGTGCTTACTGCTGACAGTATGCTTGTCCAGATCAAGAAAGTGAATCTACCTACTGTA GAAGAATTGCGGACTCTTCAGGGAACAACGGAATCTTCGTCTGATCCTAGGGTTGAAGAAAGTTTGTCTTGCTGTGAAAG ATTGCTCAATGAATTACGTCGTCTTTGGGCGAATTTTGTAGGTTTTATTTCGAGTTGCTATGACAACATCGTGTTTGTTT TGATGTGGATAGTGAGACGGATTAACCTTTTGCCTGGGCTGGGGTGTTTGCCTTTCCATAATCCCGATGCTTCTCAAGAA GACCAGAGGTCTTCTTCCGGAGAGCGTTCTACAAGGAGAGAACGCCTTTCTCGGCGATCTGACTTATCTGAGGAAGAGAT GATTGTGAGAGCTGAGGGAGAGTCTATACATCCTGAATCTCCCCATGGAGATGGCCGTAACCAACCTAGTCGAGGTGATA AGCAAGACTCTGATAGTGAGGAAGAGACGGAGTTATAA
Upstream 100 bases:
>100_bases TTATTTTAATTATATTTTTGTTTTTATTTAGAAATTTAATAATCTCAACTTATAATTAAGTGTATACTTATTAATCTTTT ATTTTTGTAATTGTAGTACT
Downstream 100 bases:
>100_bases TAAAGAATGATCTCTTCTGAGTAGAAACTATCGAATCAGAATTGCCAGCTTTTACTCTCACCCAGTCCTATTTTTATAGT TCAAATTGCGGTGGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAV ADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGK AHLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQE DQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL
Sequences:
>Translated_385_residues MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAV ADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGK AHLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQE DQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL >Mature_384_residues SSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEETASNPKVDEIVAEVSSSRAVA DQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKA HLILSKLTDVHHKLQGLSREDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTVE ELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRRINLLPGLGCLPFHNPDASQED QRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPESPHGDGRNQPSRGDKQDSDSEEETEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0499/CT_392/TC_0671 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y499_CHLPN (Q9Z852)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: E72070 - PIR: G86552 - PIR: H81595 - RefSeq: NP_224695.1 - RefSeq: NP_300554.1 - RefSeq: NP_444806.1 - RefSeq: NP_876791.1 - GeneID: 1467198 - GeneID: 895443 - GeneID: 919244 - GeneID: 962912 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0255 - KEGG: cpj:CPj0499 - KEGG: cpn:CPn0499 - KEGG: cpt:CpB0519 - TIGR: CP_0255 - OMA: SINQSIC - ProtClustDB: CLSK871353 - BioCyc: CPNE115711:CP_0255-MONOMER - BioCyc: CPNE115713:CPN0499-MONOMER - BioCyc: CPNE138677:CPJ0499-MONOMER - BioCyc: CPNE182082:CPB0519-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42459; Mature: 42328
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEE CCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH TASNPKVDEIVAEVSSSRAVADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKAHLILSKLTDVHHKLQGLSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCC EDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCHH EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRR HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLLPGLGCLPFHNPDASQEDQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPES HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCC PHGDGRNQPSRGDKQDSDSEEETEL CCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SSVNQSSGTPNPEEVTSPESTEENKNVVSSDEAQATHAVALPIVTQLSLPEGVGTSSEE CCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH TASNPKVDEIVAEVSSSRAVADQISSLVERVGELLDDLKGAQSLFTSFQSELKNCLPAWK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTRRLETRGAGDNADIARLELFRSDYEAVLGHANQFHGKAHLILSKLTDVHHKLQGLSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCC EDLSLAFDNNDRVLEHLGSLGLDVDAEGNWSLSCERGIPRLVLTADSMLVQIKKVNLPTV CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCHH EELRTLQGTTESSSDPRVEESLSCCERLLNELRRLWANFVGFISSCYDNIVFVLMWIVRR HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLLPGLGCLPFHNPDASQEDQRSSSGERSTRRERLSRRSDLSEEEMIVRAEGESIHPES HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCC PHGDGRNQPSRGDKQDSDSEEETEL CCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362