Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836029

GI number: 15836029

Start: 577401

End: 578354

Strand: Reverse

Name: Not Available

Synonym: CPj0498

Alternate gene names: NA

Gene position: 578354-577401 (Counterclockwise)

Preceding gene: 15836030

Following gene: 15836028

Centisome position: 47.15

GC content: 43.29

Gene sequence:

>954_bases
ATGAATAGAAGAAAAGCAAGATGGGTAGTGGCATTGTTCGCAATGACGGCGCTCATTTCTGTTGGGTGTTGTCCTTGGTC
ACAAGCGAAATCAAGATGTTCTATTGATAAGTATATTCCTGTAGTCAATCGTTTACTAGAAGTTTGTGGACTTCCTGAAG
CTGAGAATGTTGAGGATTTAATCGAGTCCTCGTCTGCTTGGGTACTGACTCCTGAAGAACGTTTTTCTGGAGAGTTAGTC
TCTATCTGTCAGGTTAAAGATGAGCATGCTTTCTATAACGATTTGTCTTTATTACATATGACTCAGGCTGTGCCTTCGTA
TTCTGCAACGTATGATTGTGCTGTAGTTTTTGGCGGGCCTTTGCCAGCGCTACGTCAGCGCTTAGATTTTTTGGTGCGAG
AGTGGCAGCGTGGCGTGCGCTTTAAGAAAATCGTTTTTCTATGTGGAGAGCGAGGGCGCTATCAGTCTATTGAAGAACAA
GAGCATTTCTTTGATTCTCGGTACAATCCTTTCCCTACTGAAGAGAACTGGGAATCTGGTAACCGAGTTACTCCCTCTTC
TGAAGAAGAGATTGCCAAATTTGTTTGGATGCAAATGCTTTTACCTAGAGCATGGCGAGATAGTACTTCAGGAGTCAGAG
TGACATTTCTTCTAGCAAAGCCAGAGGAAAATCGTGTGGTTGCGAATCGTAAGGACACCTTACTTTTATTCCGTTCTTAT
CAAGAAGCGTTTCCGGGACGCGTGTTATTTGTAAGTAGTCAACCCTTTATCGGTTTAGATGCTTGCAGGGTCGGGCAGTT
TTTCAAAGGGGAAAGCTATGATCTTGCTGGACCTGGATTTGCTCAAGGAGTCTTGAAGTATCATTGGGCTCCAAGGATTT
GTCTACATACTTTAGCGGAATGGTTAAAGGAAACGAACGGCTGCTTAAATATTTCAGAGGGTTGTTTTGGATGA

Upstream 100 bases:

>100_bases
CTATTTTTATAGTTCAAATTGCGGTGGTTTGTTTATTGTTTTTTTTGAATTTTTGTTATATGGTGGCGTCTAATATTGCC
GATTAAGGAGGGCGCCCTTT

Downstream 100 bases:

>100_bases
TTCATGGATCTTAGAGGTTAAAGTCACTCCAAAAGCCAAAGAGAACAAAATTGTAGGCTTTGATGGACAAGCTTTGAAGG
TCCGTGTTACCGAACCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNRRKARWVVALFAMTALISVGCCPWSQAKSRCSIDKYIPVVNRLLEVCGLPEAENVEDLIESSSAWVLTPEERFSGELV
SICQVKDEHAFYNDLSLLHMTQAVPSYSATYDCAVVFGGPLPALRQRLDFLVREWQRGVRFKKIVFLCGERGRYQSIEEQ
EHFFDSRYNPFPTEENWESGNRVTPSSEEEIAKFVWMQMLLPRAWRDSTSGVRVTFLLAKPEENRVVANRKDTLLLFRSY
QEAFPGRVLFVSSQPFIGLDACRVGQFFKGESYDLAGPGFAQGVLKYHWAPRICLHTLAEWLKETNGCLNISEGCFG

Sequences:

>Translated_317_residues
MNRRKARWVVALFAMTALISVGCCPWSQAKSRCSIDKYIPVVNRLLEVCGLPEAENVEDLIESSSAWVLTPEERFSGELV
SICQVKDEHAFYNDLSLLHMTQAVPSYSATYDCAVVFGGPLPALRQRLDFLVREWQRGVRFKKIVFLCGERGRYQSIEEQ
EHFFDSRYNPFPTEENWESGNRVTPSSEEEIAKFVWMQMLLPRAWRDSTSGVRVTFLLAKPEENRVVANRKDTLLLFRSY
QEAFPGRVLFVSSQPFIGLDACRVGQFFKGESYDLAGPGFAQGVLKYHWAPRICLHTLAEWLKETNGCLNISEGCFG
>Mature_317_residues
MNRRKARWVVALFAMTALISVGCCPWSQAKSRCSIDKYIPVVNRLLEVCGLPEAENVEDLIESSSAWVLTPEERFSGELV
SICQVKDEHAFYNDLSLLHMTQAVPSYSATYDCAVVFGGPLPALRQRLDFLVREWQRGVRFKKIVFLCGERGRYQSIEEQ
EHFFDSRYNPFPTEENWESGNRVTPSSEEEIAKFVWMQMLLPRAWRDSTSGVRVTFLLAKPEENRVVANRKDTLLLFRSY
QEAFPGRVLFVSSQPFIGLDACRVGQFFKGESYDLAGPGFAQGVLKYHWAPRICLHTLAEWLKETNGCLNISEGCFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36205; Mature: 36205

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRKARWVVALFAMTALISVGCCPWSQAKSRCSIDKYIPVVNRLLEVCGLPEAENVEDL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
IESSSAWVLTPEERFSGELVSICQVKDEHAFYNDLSLLHMTQAVPSYSATYDCAVVFGGP
HCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
LPALRQRLDFLVREWQRGVRFKKIVFLCGERGRYQSIEEQEHFFDSRYNPFPTEENWESG
HHHHHHHHHHHHHHHHHCCHHEEHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
NRVTPSSEEEIAKFVWMQMLLPRAWRDSTSGVRVTFLLAKPEENRVVANRKDTLLLFRSY
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCEEHHHHH
QEAFPGRVLFVSSQPFIGLDACRVGQFFKGESYDLAGPGFAQGVLKYHWAPRICLHTLAE
HHHCCCEEEEECCCCCCCCHHHHHCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
WLKETNGCLNISEGCFG
HHHHCCCCEECCCCCCC
>Mature Secondary Structure
MNRRKARWVVALFAMTALISVGCCPWSQAKSRCSIDKYIPVVNRLLEVCGLPEAENVEDL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
IESSSAWVLTPEERFSGELVSICQVKDEHAFYNDLSLLHMTQAVPSYSATYDCAVVFGGP
HCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
LPALRQRLDFLVREWQRGVRFKKIVFLCGERGRYQSIEEQEHFFDSRYNPFPTEENWESG
HHHHHHHHHHHHHHHHHCCHHEEHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
NRVTPSSEEEIAKFVWMQMLLPRAWRDSTSGVRVTFLLAKPEENRVVANRKDTLLLFRSY
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCEEHHHHH
QEAFPGRVLFVSSQPFIGLDACRVGQFFKGESYDLAGPGFAQGVLKYHWAPRICLHTLAE
HHHCCCEEEEECCCCCCCCHHHHHCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
WLKETNGCLNISEGCFG
HHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA