| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836047
GI number: 15836047
Start: 596572
End: 598134
Strand: Reverse
Name: Not Available
Synonym: CPj0516
Alternate gene names: NA
Gene position: 598134-596572 (Counterclockwise)
Preceding gene: 15836048
Following gene: 15836030
Centisome position: 48.76
GC content: 45.11
Gene sequence:
>1563_bases ATGGTGGCAAGGGGGCTCTGTGACTTCCCTACTTTAGTTCCTAATGAGCGCTTGCCTATAGGGCCTTTCTTTGTCCCGCA GCACACTTCCGGTGCGAAGGGTAAGGAGTTTGCTAAAAGGAATTTTTCTATAATTTCGGGATTGGATGACATATTAAAAT TATGTATTCTTCAAAGGCGTCCTTTTGCTTTGCAGTGGGATAACCTCTCTGTGAAAAGTGATTATGAGGAGGCTGGGCCC GCTATTGGGATACGTTCTCTTGAGCCACAAGTTTCTCAAATTTCTCCAGCCCACGGCCGGCTATGTAGTACTTTGGTCCA GTGGGCCCCTATCCTTGGTTCTGAGGAGCGGCTAGTTTGGTTAGAAGAAACAATGAAGCGCCTAAAGTTTCCTAAAAGTT TAGGTAGTAAGGACGCTGTTATTGTGGATTCGGAAATGGTTCCTGTGAACGCCAATCCTACTCAAGAGATACCTGCAGCT TCCGAGACTGTAGAGTCTTCACCTGTAGCTCCAGGGAATACAACAGATACCATGCCTGCAGCTTCGGGAACTACAGACAC CACATCTGGGGTTTCAGAGGCTGCGGCGGCTGAGGCTACCGTGGATTCTACACCAGGGACAGAGGAGGAGCCGAGTTTTT CTCTGAGGTATGCGCTTGTAGTTCAAAATGTTCCCTATCCAGAGCCGCCTAAAGAACCTGAGGTGATGTTTACAGATGAA GAAAAAAGTCTGATTTTAGAAGCTACTCGTGCGCGTCGTATGGAGTTGGACTTGTATAATGGCTATTTAGCTGATTATGA ACTTTCTAAGGATGAAATACAGAAACACGTTCCTGATTTACCTGAGAATTGGCGTACGAATTGGCGTTGGTCGGAGAGGC TCTATAAATTTTTCTTTAAAACAAAGAAAGAAGGATTAGAAGAAATTTTCTTAAACAAAGAGTTAGGGAATATGATTCTT GCCCGAGGGCTGGCGGCAACTCAGTCACAAGCACGTATTAAAGTATTCAATTCTTTAGTGGCATGGCTCTTGCAAAGCTT TAACGTAGGGAGGAGCTGTACAGCTAAACCTCTTCCTACGTCAAAACTAGACCTCTTTAAATCGGAATTCGAGTCTAAGC CTAAAAATAACATCTTAACGGAATTTTTGGTGGCTTCTGATGAGGAGATTCTCTTTAAGGGGCTACGGGTCCTAGAGCCT GGAATCGAAGGTTGGTATGACCATCCTGATCAAGCTGGAGAGATTCGGTCGGTACTCGAGGGTCTGGTGCAGGCTGGACG TATTTCTGGATATTGGGAGAATCAGCCGTTTGGGAGATTTGTCCTTAGAGGAGTTGGTGAAAGACGTACCGAGCTTGTAG AGCTTTTGGAGAGTTTAGTTGCTTCTGGTGAGATTATGCAGTTCTTTGAGTCTTCGGATGAAGAGGGTGCTTTTATTATC GATAACGAACCTAGCAAGACTGCTATGCTAAAACAGCGATTTAAGAGTTGTGTCAGGACGAAGCTTGTCGGGAGTTTTGC TGATGAGAGTCTTCCCAGAGGTAGGTTTACCATTTTAGTTTAG
Upstream 100 bases:
>100_bases ATGGGATTGAAGAATATCGATATCATTCCGAGTGTCATGGTTCGTGAAGATTATCCTAGCCGTCCTGGGGAGGGCTATCG CGAAGGCCTATTACGTATGT
Downstream 100 bases:
>100_bases CGTGGGGTAGAGCACTCCACGAATCTTAGGGAGCTCCTTGCGACCAAGCTTGGAGATCCTCCATGTTTTATTGTTTCTCT AGTAGCCAAATCGTAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV
Sequences:
>Translated_520_residues MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV >Mature_520_residues MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58092; Mature: 58092
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRR CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PFALQWDNLSVKSDYEEAGPAIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVW CCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEH LEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAASETVESSPVAPGNTTDTMPA HHHHHHHHHCCHHCCCCCEEEECCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC ASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECC EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFK CHHHHHHHHHHHHEEEEHHCCEECCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH TKKEGLEEIFLNKELGNMILARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEPGIEGWYDHPDQAGEIRSVLE HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH GLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEE DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRR CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PFALQWDNLSVKSDYEEAGPAIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVW CCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEH LEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAASETVESSPVAPGNTTDTMPA HHHHHHHHHCCHHCCCCCEEEECCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC ASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECC EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFK CHHHHHHHHHHHHEEEEHHCCEECCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH TKKEGLEEIFLNKELGNMILARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEPGIEGWYDHPDQAGEIRSVLE HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH GLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEE DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA