Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836047

GI number: 15836047

Start: 596572

End: 598134

Strand: Reverse

Name: Not Available

Synonym: CPj0516

Alternate gene names: NA

Gene position: 598134-596572 (Counterclockwise)

Preceding gene: 15836048

Following gene: 15836030

Centisome position: 48.76

GC content: 45.11

Gene sequence:

>1563_bases
ATGGTGGCAAGGGGGCTCTGTGACTTCCCTACTTTAGTTCCTAATGAGCGCTTGCCTATAGGGCCTTTCTTTGTCCCGCA
GCACACTTCCGGTGCGAAGGGTAAGGAGTTTGCTAAAAGGAATTTTTCTATAATTTCGGGATTGGATGACATATTAAAAT
TATGTATTCTTCAAAGGCGTCCTTTTGCTTTGCAGTGGGATAACCTCTCTGTGAAAAGTGATTATGAGGAGGCTGGGCCC
GCTATTGGGATACGTTCTCTTGAGCCACAAGTTTCTCAAATTTCTCCAGCCCACGGCCGGCTATGTAGTACTTTGGTCCA
GTGGGCCCCTATCCTTGGTTCTGAGGAGCGGCTAGTTTGGTTAGAAGAAACAATGAAGCGCCTAAAGTTTCCTAAAAGTT
TAGGTAGTAAGGACGCTGTTATTGTGGATTCGGAAATGGTTCCTGTGAACGCCAATCCTACTCAAGAGATACCTGCAGCT
TCCGAGACTGTAGAGTCTTCACCTGTAGCTCCAGGGAATACAACAGATACCATGCCTGCAGCTTCGGGAACTACAGACAC
CACATCTGGGGTTTCAGAGGCTGCGGCGGCTGAGGCTACCGTGGATTCTACACCAGGGACAGAGGAGGAGCCGAGTTTTT
CTCTGAGGTATGCGCTTGTAGTTCAAAATGTTCCCTATCCAGAGCCGCCTAAAGAACCTGAGGTGATGTTTACAGATGAA
GAAAAAAGTCTGATTTTAGAAGCTACTCGTGCGCGTCGTATGGAGTTGGACTTGTATAATGGCTATTTAGCTGATTATGA
ACTTTCTAAGGATGAAATACAGAAACACGTTCCTGATTTACCTGAGAATTGGCGTACGAATTGGCGTTGGTCGGAGAGGC
TCTATAAATTTTTCTTTAAAACAAAGAAAGAAGGATTAGAAGAAATTTTCTTAAACAAAGAGTTAGGGAATATGATTCTT
GCCCGAGGGCTGGCGGCAACTCAGTCACAAGCACGTATTAAAGTATTCAATTCTTTAGTGGCATGGCTCTTGCAAAGCTT
TAACGTAGGGAGGAGCTGTACAGCTAAACCTCTTCCTACGTCAAAACTAGACCTCTTTAAATCGGAATTCGAGTCTAAGC
CTAAAAATAACATCTTAACGGAATTTTTGGTGGCTTCTGATGAGGAGATTCTCTTTAAGGGGCTACGGGTCCTAGAGCCT
GGAATCGAAGGTTGGTATGACCATCCTGATCAAGCTGGAGAGATTCGGTCGGTACTCGAGGGTCTGGTGCAGGCTGGACG
TATTTCTGGATATTGGGAGAATCAGCCGTTTGGGAGATTTGTCCTTAGAGGAGTTGGTGAAAGACGTACCGAGCTTGTAG
AGCTTTTGGAGAGTTTAGTTGCTTCTGGTGAGATTATGCAGTTCTTTGAGTCTTCGGATGAAGAGGGTGCTTTTATTATC
GATAACGAACCTAGCAAGACTGCTATGCTAAAACAGCGATTTAAGAGTTGTGTCAGGACGAAGCTTGTCGGGAGTTTTGC
TGATGAGAGTCTTCCCAGAGGTAGGTTTACCATTTTAGTTTAG

Upstream 100 bases:

>100_bases
ATGGGATTGAAGAATATCGATATCATTCCGAGTGTCATGGTTCGTGAAGATTATCCTAGCCGTCCTGGGGAGGGCTATCG
CGAAGGCCTATTACGTATGT

Downstream 100 bases:

>100_bases
CGTGGGGTAGAGCACTCCACGAATCTTAGGGAGCTCCTTGCGACCAAGCTTGGAGATCCTCCATGTTTTATTGTTTCTCT
AGTAGCCAAATCGTAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP
AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA
SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE
EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL
ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP
GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII
DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV

Sequences:

>Translated_520_residues
MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP
AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA
SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE
EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL
ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP
GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII
DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV
>Mature_520_residues
MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRRPFALQWDNLSVKSDYEEAGP
AIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVWLEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAA
SETVESSPVAPGNTTDTMPAASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE
EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFKTKKEGLEEIFLNKELGNMIL
ARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPTSKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEP
GIEGWYDHPDQAGEIRSVLEGLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII
DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58092; Mature: 58092

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRR
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFALQWDNLSVKSDYEEAGPAIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVW
CCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEH
LEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAASETVESSPVAPGNTTDTMPA
HHHHHHHHHCCHHCCCCCEEEECCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
ASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECC
EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFK
CHHHHHHHHHHHHEEEEHHCCEECCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
TKKEGLEEIFLNKELGNMILARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEPGIEGWYDHPDQAGEIRSVLE
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
GLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII
HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEE
DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MVARGLCDFPTLVPNERLPIGPFFVPQHTSGAKGKEFAKRNFSIISGLDDILKLCILQRR
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFALQWDNLSVKSDYEEAGPAIGIRSLEPQVSQISPAHGRLCSTLVQWAPILGSEERLVW
CCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEH
LEETMKRLKFPKSLGSKDAVIVDSEMVPVNANPTQEIPAASETVESSPVAPGNTTDTMPA
HHHHHHHHHCCHHCCCCCEEEECCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
ASGTTDTTSGVSEAAAAEATVDSTPGTEEEPSFSLRYALVVQNVPYPEPPKEPEVMFTDE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECC
EKSLILEATRARRMELDLYNGYLADYELSKDEIQKHVPDLPENWRTNWRWSERLYKFFFK
CHHHHHHHHHHHHEEEEHHCCEECCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
TKKEGLEEIFLNKELGNMILARGLAATQSQARIKVFNSLVAWLLQSFNVGRSCTAKPLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SKLDLFKSEFESKPKNNILTEFLVASDEEILFKGLRVLEPGIEGWYDHPDQAGEIRSVLE
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
GLVQAGRISGYWENQPFGRFVLRGVGERRTELVELLESLVASGEIMQFFESSDEEGAFII
HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEE
DNEPSKTAMLKQRFKSCVRTKLVGSFADESLPRGRFTILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA