| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835944
GI number: 15835944
Start: 455542
End: 456321
Strand: Direct
Name: Not Available
Synonym: CPj0411
Alternate gene names: NA
Gene position: 455542-456321 (Clockwise)
Preceding gene: 15835943
Following gene: 15835945
Centisome position: 37.14
GC content: 42.44
Gene sequence:
>780_bases ATGATACTGACTGCTGCCTTTTCTCCTTGCCCGAATGATATTTTCCTTTTTCGTTCTTTCTTAAAAGACCCCCAATTCAG GCCTCTTCTTAACCAGGTAACAATTGCGGATATTGAAACTTTGAATACCCTAGCTCTGCAGCGACGGCTCTCCCTAATGA AAATGTCAGCAGCGCTCTTCCCTCTAGTTTCTGATTATTATAATCTTATGGACGTAGGAAATACCTTAGGATACAACAGC GGTCCTATCGTCCTCTCCTTAGATCCTGAATGTTCTCTAGATACCTTGGCAACTCCTGGAGAGATGACAACCGCTCATGC TCTCTGTAAACTTTACTATCCCAAGGCAAAACTCATTCCCATGCCTTATGACAAAATTCTATCCGCGATACTGCAAGGGA AAGTCGATGGAGGCGCTCTGATTCATGAAGAGCGCTTCAGCTACGATCTCCAATTGACATTGCGGGCAGACTTTGGAGAG CTATGGCGCCGTAAGACCATCTTTCCCCTTCCTTTAGGATGTTTAGCCATTGCGAAATATGTTCCTATGGCTACAGTGGA TGCTCTAACAGCAGCATTAAGAAAGTCTTTAATTTGCTCCCTGAAAGATCCTATAACTGCGGGAGCAAAAGCAGTAGAAT ACTCTAAAAATAAAAACGTGACCGTGATTCATAGATTCATAGGAACCTATATCAACAAAGAAACCTTTCAACTATCTAAA ACTGGGAAAAAAGCTTTACATATGCTCTGGAAGGCCAATGAATGCTGTCAATACACCTAA
Upstream 100 bases:
>100_bases TTCCTAAGTCTTACTTCGAATGGCTGGAAAACCAAGGAGCTTTGGATAAGCCTGAAAATAAAGACATCAAAGCCGCTATA GCTCTATTACATCAACCGAC
Downstream 100 bases:
>100_bases AAAAATCCTTTGCATTGTTGCAGACTATAGAGAAATTTCTCCTCTAATTGAACAACTTGATTTTACACAGATCAACGAGC ATCTCTATAGTTATCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MILTAAFSPCPNDIFLFRSFLKDPQFRPLLNQVTIADIETLNTLALQRRLSLMKMSAALFPLVSDYYNLMDVGNTLGYNS GPIVLSLDPECSLDTLATPGEMTTAHALCKLYYPKAKLIPMPYDKILSAILQGKVDGGALIHEERFSYDLQLTLRADFGE LWRRKTIFPLPLGCLAIAKYVPMATVDALTAALRKSLICSLKDPITAGAKAVEYSKNKNVTVIHRFIGTYINKETFQLSK TGKKALHMLWKANECCQYT
Sequences:
>Translated_259_residues MILTAAFSPCPNDIFLFRSFLKDPQFRPLLNQVTIADIETLNTLALQRRLSLMKMSAALFPLVSDYYNLMDVGNTLGYNS GPIVLSLDPECSLDTLATPGEMTTAHALCKLYYPKAKLIPMPYDKILSAILQGKVDGGALIHEERFSYDLQLTLRADFGE LWRRKTIFPLPLGCLAIAKYVPMATVDALTAALRKSLICSLKDPITAGAKAVEYSKNKNVTVIHRFIGTYINKETFQLSK TGKKALHMLWKANECCQYT >Mature_259_residues MILTAAFSPCPNDIFLFRSFLKDPQFRPLLNQVTIADIETLNTLALQRRLSLMKMSAALFPLVSDYYNLMDVGNTLGYNS GPIVLSLDPECSLDTLATPGEMTTAHALCKLYYPKAKLIPMPYDKILSAILQGKVDGGALIHEERFSYDLQLTLRADFGE LWRRKTIFPLPLGCLAIAKYVPMATVDALTAALRKSLICSLKDPITAGAKAVEYSKNKNVTVIHRFIGTYINKETFQLSK TGKKALHMLWKANECCQYT
Specific function: Unknown
COG id: COG2107
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28907; Mature: 28907
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTAAFSPCPNDIFLFRSFLKDPQFRPLLNQVTIADIETLNTLALQRRLSLMKMSAALF CEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVSDYYNLMDVGNTLGYNSGPIVLSLDPECSLDTLATPGEMTTAHALCKLYYPKAKLIP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECC MPYDKILSAILQGKVDGGALIHEERFSYDLQLTLRADFGELWRRKTIFPLPLGCLAIAKY CCHHHHHHHHHHCCCCCCEEEEHHHCCEEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHH VPMATVDALTAALRKSLICSLKDPITAGAKAVEYSKNKNVTVIHRFIGTYINKETFQLSK CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHH TGKKALHMLWKANECCQYT HHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MILTAAFSPCPNDIFLFRSFLKDPQFRPLLNQVTIADIETLNTLALQRRLSLMKMSAALF CEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVSDYYNLMDVGNTLGYNSGPIVLSLDPECSLDTLATPGEMTTAHALCKLYYPKAKLIP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECC MPYDKILSAILQGKVDGGALIHEERFSYDLQLTLRADFGELWRRKTIFPLPLGCLAIAKY CCHHHHHHHHHHCCCCCCEEEEHHHCCEEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHH VPMATVDALTAALRKSLICSLKDPITAGAKAVEYSKNKNVTVIHRFIGTYINKETFQLSK CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHH TGKKALHMLWKANECCQYT HHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA