Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835945

GI number: 15835945

Start: 456299

End: 456958

Strand: Direct

Name: Not Available

Synonym: CPj0412

Alternate gene names: NA

Gene position: 456299-456958 (Clockwise)

Preceding gene: 15835944

Following gene: 15835955

Centisome position: 37.2

GC content: 41.36

Gene sequence:

>660_bases
ATGAATGCTGTCAATACACCTAAAAAAATCCTTTGCATTGTTGCAGACTATAGAGAAATTTCTCCTCTAATTGAACAACT
TGATTTTACACAGATCAACGAGCATCTCTATAGTTATCGTTGTACTGACTACCATCTAGATCTCTATATTGTCCATGTTT
GGGGAAGTACAGCCGTTTTAAATGCTCTTCAAAGCTATTGCCAAGCATATACAGATTACGATCTGTGGATCAATCCAGGT
TTTGTGGGGGCATGTTCTCCCGAGATTCCTTTAGGTCAATGTTACACTATTGAGAAAATTGCAAACCTCACTACGGATAC
ACCTCCTGTTCTCTCTGAAGATCCCCCTTATATCTTTGACGCTCTACCGGATTCTCTACCTAAAAGCTCTCTGGTTACCT
CTCCAGTATTGTACCATTATGGGTTTCATAAGACGTTTAAACTTCTAGATATGGAAGGCTATGCTATAGCCTCACAAGCA
GCAGAACATCACATCCCCTGTTCTTTTCTCAAGATCACTTCTGATTATACTGTTCCAGGAGACTGTCCCTTCAGCAGATT
GGAGGAGGTATCACAAAAGCTAACTCAGACACTTGTAGAGTTGTTGCCTGAGCTCATGGAGAGAGCGATCCCACCTAAGT
TGTTATTGCCATGTCCGTAG

Upstream 100 bases:

>100_bases
GTGACCGTGATTCATAGATTCATAGGAACCTATATCAACAAAGAAACCTTTCAACTATCTAAAACTGGGAAAAAAGCTTT
ACATATGCTCTGGAAGGCCA

Downstream 100 bases:

>100_bases
GATTTGCGACTAATTTGTGATCAGGAACAAAGACCCTGTTATATTCTTTAGTCCCTGAGAGCTCCCACATTTTTAAAAAT
TCAGGACACGTCTGTAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNAVNTPKKILCIVADYREISPLIEQLDFTQINEHLYSYRCTDYHLDLYIVHVWGSTAVLNALQSYCQAYTDYDLWINPG
FVGACSPEIPLGQCYTIEKIANLTTDTPPVLSEDPPYIFDALPDSLPKSSLVTSPVLYHYGFHKTFKLLDMEGYAIASQA
AEHHIPCSFLKITSDYTVPGDCPFSRLEEVSQKLTQTLVELLPELMERAIPPKLLLPCP

Sequences:

>Translated_219_residues
MNAVNTPKKILCIVADYREISPLIEQLDFTQINEHLYSYRCTDYHLDLYIVHVWGSTAVLNALQSYCQAYTDYDLWINPG
FVGACSPEIPLGQCYTIEKIANLTTDTPPVLSEDPPYIFDALPDSLPKSSLVTSPVLYHYGFHKTFKLLDMEGYAIASQA
AEHHIPCSFLKITSDYTVPGDCPFSRLEEVSQKLTQTLVELLPELMERAIPPKLLLPCP
>Mature_219_residues
MNAVNTPKKILCIVADYREISPLIEQLDFTQINEHLYSYRCTDYHLDLYIVHVWGSTAVLNALQSYCQAYTDYDLWINPG
FVGACSPEIPLGQCYTIEKIANLTTDTPPVLSEDPPYIFDALPDSLPKSSLVTSPVLYHYGFHKTFKLLDMEGYAIASQA
AEHHIPCSFLKITSDYTVPGDCPFSRLEEVSQKLTQTLVELLPELMERAIPPKLLLPCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24691; Mature: 24691

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVNTPKKILCIVADYREISPLIEQLDFTQINEHLYSYRCTDYHLDLYIVHVWGSTAVL
CCCCCCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHH
NALQSYCQAYTDYDLWINPGFVGACSPEIPLGQCYTIEKIANLTTDTPPVLSEDPPYIFD
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCHHH
ALPDSLPKSSLVTSPVLYHYGFHKTFKLLDMEGYAIASQAAEHHIPCSFLKITSDYTVPG
CCCCCCCCHHHHCCHHHHHHCHHHHEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCC
DCPFSRLEEVSQKLTQTLVELLPELMERAIPPKLLLPCP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MNAVNTPKKILCIVADYREISPLIEQLDFTQINEHLYSYRCTDYHLDLYIVHVWGSTAVL
CCCCCCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHH
NALQSYCQAYTDYDLWINPGFVGACSPEIPLGQCYTIEKIANLTTDTPPVLSEDPPYIFD
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCHHH
ALPDSLPKSSLVTSPVLYHYGFHKTFKLLDMEGYAIASQAAEHHIPCSFLKITSDYTVPG
CCCCCCCCHHHHCCHHHHHHCHHHHEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCC
DCPFSRLEEVSQKLTQTLVELLPELMERAIPPKLLLPCP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA