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The map label for this gene is dnaQ_1

Identifier: 15835943

GI number: 15835943

Start: 454832

End: 455545

Strand: Direct

Name: dnaQ_1

Synonym: CPj0410

Alternate gene names: 15835943

Gene position: 454832-455545 (Clockwise)

Preceding gene: 15835942

Following gene: 15835944

Centisome position: 37.08

GC content: 41.6

Gene sequence:

>714_bases
ATGAGTAGTCAAACTATGGATGTTCTTATTTTCTATGATACGGAGACCACAGGAACACAAATAGAAAGAGATCGCATTAT
AGAAATTGCTGCCTACAATAGTGTCACAGATGAGTCCTTTCTTACTTATGTGAATCCGGAAATTCCCATTCCTGATGAGG
CATCCAAAATTCATGGAATCACTACGGATGCGGTACTTTCTGCTCCCAAATTTCCTGAAGCCTACGAGGGATTTAGGAAA
TTTTGCGGAGAGGACAGCATCTTAGTGGCTCATAATAATGACGGTTTTGATTTCCCCCTACTCGGTAAGGAATGTCGCAG
ACATTCCTTAGAGCCTCTGACAAACCGTACAATAGACTCTCTAAAATGGGCACAAAAATATCGCCCCGATCTACCAAAAC
ATAATTTACAATACCTAAGACAAGTTTACGGTTTTGCTGAAAATCAAGCACACCGAGCTCTAGATGACGTAGTGATATTG
CACAAGGTATTTACTTCTTTAATCGGTGATTTACCGCCCCAGCAAGTCCTCGACTTGCTGCAACAGAGCTATCACCCGAA
AGTCTTCAAAATGCCTTTTGGCAAATACAAAGGGCAGCCTCTTGTGGATATTCCTAAGTCTTACTTCGAATGGCTGGAAA
ACCAAGGAGCTTTGGATAAGCCTGAAAATAAAGACATCAAAGCCGCTATAGCTCTATTACATCAACCGACATGA

Upstream 100 bases:

>100_bases
TGTGATAGTTTTTCTCATGCTATTGGGTTGATCTCTTCTGGGAATATGAATTTGGATGAACTAAGACGTCAGGCTCTTCA
AGAGCAACAAGAAAAACGTA

Downstream 100 bases:

>100_bases
TACTGACTGCTGCCTTTTCTCCTTGCCCGAATGATATTTTCCTTTTTCGTTCTTTCTTAAAAGACCCCCAATTCAGGCCT
CTTCTTAACCAGGTAACAAT

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEASKIHGITTDAVLSAPKFPEAYEGFRK
FCGEDSILVAHNNDGFDFPLLGKECRRHSLEPLTNRTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALDDVVIL
HKVFTSLIGDLPPQQVLDLLQQSYHPKVFKMPFGKYKGQPLVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT

Sequences:

>Translated_237_residues
MSSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEASKIHGITTDAVLSAPKFPEAYEGFRK
FCGEDSILVAHNNDGFDFPLLGKECRRHSLEPLTNRTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALDDVVIL
HKVFTSLIGDLPPQQVLDLLQQSYHPKVFKMPFGKYKGQPLVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT
>Mature_236_residues
SSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEASKIHGITTDAVLSAPKFPEAYEGFRKF
CGEDSILVAHNNDGFDFPLLGKECRRHSLEPLTNRTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALDDVVILH
KVFTSLIGDLPPQQVLDLLQQSYHPKVFKMPFGKYKGQPLVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 27063; Mature: 26932

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEASKIHGI
CCCCCEEEEEEEECCCCCCEECHHHEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHCCC
TTDAVLSAPKFPEAYEGFRKFCGEDSILVAHNNDGFDFPLLGKECRRHSLEPLTNRTIDS
CHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHH
LKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALDDVVILHKVFTSLIGDLPPQQVLDLL
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QQSYHPKVFKMPFGKYKGQPLVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT
HHHCCCCEEECCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEASKIHGI
CCCCEEEEEEEECCCCCCEECHHHEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHCCC
TTDAVLSAPKFPEAYEGFRKFCGEDSILVAHNNDGFDFPLLGKECRRHSLEPLTNRTIDS
CHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHH
LKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALDDVVILHKVFTSLIGDLPPQQVLDLL
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QQSYHPKVFKMPFGKYKGQPLVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT
HHHCCCCEEECCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]