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The map label for this gene is ssb

Identifier: 15835919

GI number: 15835919

Start: 433752

End: 434234

Strand: Reverse

Name: ssb

Synonym: CPj0386

Alternate gene names: 15835919

Gene position: 434234-433752 (Counterclockwise)

Preceding gene: 15835920

Following gene: 15835918

Centisome position: 35.4

GC content: 41.61

Gene sequence:

>483_bases
ATGATGTTTGGGCATTTTGCTGGTTACCTTGGAGCAGATCCTGAAGAGCGAATGACTTCCAAAGGAAAACGTGTGATCAC
TCTGAGACTGGGAGTGAAGACTCGAGTTGGAATGAAAGATGAAACTGTTTGGTGCAAATGCAATATTTGGCACAATCGCT
ATGATAAGATGCTTCCTTACTTGAAGAAAGGCTCAGGAGTCATTGTTGCTGGCGATATCTCTGTAGAGAGTTACATGAGC
AAAGATGGTTCACCGCAATCTTCTTTAGTGATTAGTGTAGATTCTTTGAAATTCAGTCCTTTCGGTCGCAATGAAGGCAG
CCGTTCTCCATCTTTAGAAGACAATCATCAGCAAGTGGGATATGAATCTGTATCCGTAGGGTTTGAAGGTGAAGCACTGG
ACGCAGAAGCTATTAAAGATAAAGATATGTATGCTGGTTATGGTCAAGAACAGCAGTATGTCTGTGAAGATGTTCCTTTT
TAA

Upstream 100 bases:

>100_bases
ACTTTATTGACTTCTCGTTTTTGTCCTGAATCTGTTTTGAGAAGTTCTTAAGATGTATTAATTAAAGAAGTATTAAAAAT
AGAAATCTAAAGGCTATCTT

Downstream 100 bases:

>100_bases
TTCCTAGTCATTAAAGGAGAGTTTGTGGTTTTATTTCATGCTCAAGCCTCTGGGCGTAATCGTGTTAAGGCAGATGCTAT
AGTCCTGCCCTTTTGGCATT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMS
KDGSPQSSLVISVDSLKFSPFGRNEGSRSPSLEDNHQQVGYESVSVGFEGEALDAEAIKDKDMYAGYGQEQQYVCEDVPF

Sequences:

>Translated_160_residues
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMS
KDGSPQSSLVISVDSLKFSPFGRNEGSRSPSLEDNHQQVGYESVSVGFEGEALDAEAIKDKDMYAGYGQEQQYVCEDVPF
>Mature_160_residues
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMS
KDGSPQSSLVISVDSLKFSPFGRNEGSRSPSLEDNHQQVGYESVSVGFEGEALDAEAIKDKDMYAGYGQEQQYVCEDVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSB_CHLPN (Q9Z8F7)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   H72083
- PIR:   H86538
- RefSeq:   NP_224586.1
- RefSeq:   NP_300443.1
- RefSeq:   NP_444917.1
- RefSeq:   NP_876672.1
- ProteinModelPortal:   Q9Z8F7
- SMR:   Q9Z8F7
- PHCI-2DPAGE:   Q9Z8F7
- GeneID:   1467079
- GeneID:   894901
- GeneID:   919225
- GeneID:   963696
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0369
- KEGG:   cpn:CPn0386
- KEGG:   cpt:CpB0398
- TIGR:   CP_0369
- HOGENOM:   HBG056970
- OMA:   ISVESYM
- ProtClustDB:   PRK06293
- BioCyc:   CPNE115711:CP_0369-MONOMER
- BioCyc:   CPNE115713:CPN0386-MONOMER
- BioCyc:   CPNE138677:CPJ0386-MONOMER
- BioCyc:   CPNE182082:CPB0398-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 17823; Mature: 17823

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPY
CCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHH
LKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKFSPFGRNEGSRSPSLEDNHQQVG
HHCCCCEEEEECCCHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHCC
YESVSVGFEGEALDAEAIKDKDMYAGYGQEQQYVCEDVPF
CEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIWHNRYDKMLPY
CCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHH
LKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKFSPFGRNEGSRSPSLEDNHQQVG
HHCCCCEEEEECCCHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHCC
YESVSVGFEGEALDAEAIKDKDMYAGYGQEQQYVCEDVPF
CEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362