| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835920
GI number: 15835920
Start: 434405
End: 434905
Strand: Reverse
Name: Not Available
Synonym: CPj0387
Alternate gene names: NA
Gene position: 434905-434405 (Counterclockwise)
Preceding gene: 15835922
Following gene: 15835919
Centisome position: 35.46
GC content: 40.12
Gene sequence:
>501_bases ATGTCCAGGCAAAATGCTGAGGAAAATCTAAAAAATTTTGCTAAAGAATTAAAACTGCCGGATGTAGCTTTTGATCAGAA TAACACGTGCATTTTATTTGTTGATGGTGAGTTCTCTCTTCACCTTACTTATGAAGAACATTCTGATCGTCTTTATGTCT ACGCTCCTCTGTTAGATGGACTCCCTGATAATACTCAGAGGAAATTGGCCTTATATGAGAAATTATTAGAAGGATCTATG CTTGGCGGTCAGATGGCTGGAGGTGGAGTAGGTGTTGCTACTAAGGAACAGCTCATTCTCATGCACTGCGTTTTGGATAT GAAATATGCTGAAACGAATTTACTAAAAGCATTTGCTCAATTGTTTATTGAAACTGTTGTTAAGTGGCGTACCGTGTGTG CTGATATTTGTGCTGGTAGAGAACCTTCTGTAGATACAATGCCACAAATGCCTCAAGGCGGTGGTGGAATGCAACCTCCT CCTACAGGTATTCGTGCTTAA
Upstream 100 bases:
>100_bases ACAAGGGAGTTTTTGATTTTAAGCCTCTGAAATCGTTTACTAACAAATCACTCTTATGGTAACTTGAAACAACAACAATC TATTACAAGGAGATTCCCTC
Downstream 100 bases:
>100_bases TTAAGCATATAAGTACTACATCTTTTTTCTAATTTAAAAGATTGATAAAGCTCTTCTTAGAGAAGAAATGACTTTATTGA CTTCTCGTTTTTGTCCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSRQNAEENLKNFAKELKLPDVAFDQNNTCILFVDGEFSLHLTYEEHSDRLYVYAPLLDGLPDNTQRKLALYEKLLEGSM LGGQMAGGGVGVATKEQLILMHCVLDMKYAETNLLKAFAQLFIETVVKWRTVCADICAGREPSVDTMPQMPQGGGGMQPP PTGIRA
Sequences:
>Translated_166_residues MSRQNAEENLKNFAKELKLPDVAFDQNNTCILFVDGEFSLHLTYEEHSDRLYVYAPLLDGLPDNTQRKLALYEKLLEGSM LGGQMAGGGVGVATKEQLILMHCVLDMKYAETNLLKAFAQLFIETVVKWRTVCADICAGREPSVDTMPQMPQGGGGMQPP PTGIRA >Mature_165_residues SRQNAEENLKNFAKELKLPDVAFDQNNTCILFVDGEFSLHLTYEEHSDRLYVYAPLLDGLPDNTQRKLALYEKLLEGSML GGQMAGGGVGVATKEQLILMHCVLDMKYAETNLLKAFAQLFIETVVKWRTVCADICAGREPSVDTMPQMPQGGGGMQPPP TGIRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18337; Mature: 18206
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQNAEENLKNFAKELKLPDVAFDQNNTCILFVDGEFSLHLTYEEHSDRLYVYAPLLDG CCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCC LPDNTQRKLALYEKLLEGSMLGGQMAGGGVGVATKEQLILMHCVLDMKYAETNLLKAFAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIETVVKWRTVCADICAGREPSVDTMPQMPQGGGGMQPPPTGIRA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRQNAEENLKNFAKELKLPDVAFDQNNTCILFVDGEFSLHLTYEEHSDRLYVYAPLLDG CCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCC LPDNTQRKLALYEKLLEGSMLGGQMAGGGVGVATKEQLILMHCVLDMKYAETNLLKAFAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFIETVVKWRTVCADICAGREPSVDTMPQMPQGGGGMQPPPTGIRA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA