Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835907

GI number: 15835907

Start: 419927

End: 420673

Strand: Direct

Name: Not Available

Synonym: CPj0374

Alternate gene names: 15835907

Gene position: 419927-420673 (Clockwise)

Preceding gene: 15835906

Following gene: 15835908

Centisome position: 34.24

GC content: 46.59

Gene sequence:

>747_bases
ATGACTCTATCCTTCCACACTCACCCTCTGAACTATTGGACTTTCGAAGAATTCGATGGTTTGCCTATACGCCACGGAGT
CTTTTCAAAACAAAAGGATGCCGAGGGCACGGTCTTCGCAGCCAAGAATCCTGAGATTGCTTCAGCTCTCCAATCTCCGA
AGTATTGCGACCTTCATCAACGCCACGGCACTTCCGTACGTTGTGTTACACCTACATCCCCCACCTACCAACCTGCAGAC
GGACTGTGCACGCAGTCTCCGCTCCTCTCTCTCCATATCCGCCATTCCGATTGCCAAGCAGCTATCTTTTATGATCGAGA
ACACCACGCAATCGCAAATGTACACAGCGGATGGCGAGGATTGCTTGGCAATATCTATGCTGTCACCGTAGGTACTATGA
AAAAATTATTTCATACAAAACCACAAGATCTCTTCGTAGCTATCGGCCCTTCCATCGGTCCAGATTATGCTATCTATCCC
GATTACGCTACGTTATTTCCTCGTAGCTTTCTTCCCTTTATGAATCCCAAAAACCATTTTGACCTGCGTGCGATTGCTCG
CAAGCAACTTACGAATTTAGGAATCTCTAAAGACCGCATTTTTATCTCAGACCTCTGTACCTACACGGAACACGACGCTT
TCTTTTCTTCAAGGTACCTTGCTCACCATCCCGATCCCAATCTCACAGGCCAACATTCAAAAAATAGAAATAATGTAACC
GCCGTCCTTCTCCTACCCAGAGATTAA

Upstream 100 bases:

>100_bases
TAAAAGCTCACATACCCATGGAAGATGCTGAAGAAGAATTAATTCGACTTTTACAAGAACATGGGGTATGGAAAGACCCT
GAAGAAACTAAGTTGACAGT

Downstream 100 bases:

>100_bases
AAAGATCCAGCCAAGCTTCTTTTCCTTTCCCCTAAGGACCTTAGCTTCTAGAAGAACATGCTTCGTTCCAACCCACTCAG
AATTCAGTAATCTTCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPAD
GLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYP
DYATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT
AVLLLPRD

Sequences:

>Translated_248_residues
MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPAD
GLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYP
DYATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT
AVLLLPRD
>Mature_247_residues
TLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPADG
LCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPD
YATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVTA
VLLLPRD

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=168, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28002; Mature: 27871

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQ
CEEEEECCCCCCEEHHHCCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHH
RHGTSVRCVTPTSPTYQPADGLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRG
HCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEHHHHCCHHH
LLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPDYATLFPRSFLPFMNPKNHF
HHCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHCCHHHCCCCCCCCCC
DLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT
HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE
AVLLLPRD
EEEEEECC
>Mature Secondary Structure 
TLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQ
EEEEECCCCCCEEHHHCCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHH
RHGTSVRCVTPTSPTYQPADGLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRG
HCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEHHHHCCHHH
LLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPDYATLFPRSFLPFMNPKNHF
HHCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHCCHHHCCCCCCCCCC
DLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT
HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE
AVLLLPRD
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]