| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835606
GI number: 15835606
Start: 87266
End: 87715
Strand: Reverse
Name: Not Available
Synonym: CPj0071
Alternate gene names: NA
Gene position: 87715-87266 (Counterclockwise)
Preceding gene: 15835607
Following gene: 15835604
Centisome position: 7.15
GC content: 36.22
Gene sequence:
>450_bases TTGGAATTTATCTGTCCTCTGCAACACGCTAGGTGTTTAAAAAAACAGCATAAAATTATTGAGGAGCTATTTCCAGAACC TTTTCAAAAAGATCATCTGTATCTTAAGTTGATGGAAAATAGTTCTTCAAGGGATGCTTTTGACAAGAAGCGCGTGTTGA AGGAGAACTTGGTTGTAGGTTGTCAGAGTGATTTATATCTTTACGAGGTATATCAAGATGGAATTTTATTTTTTTTCACT TATACGAAAGCTTTAATGTCTTCAGGAATCGCCTCTTTATTTACTGAGGTATATTCTGGAGAAACTCCTTCTACAATTTT GACATGCAAGCCAATTTTTTTTCAGCGCCTGACTCCCTATCTTTCTTTTGGTAGGTTGAATGGTGGAGAATCTCTGTACA TGCGTATGAAGCAAATAGCGGTACAATACTTAAAGCCGCCTCAAACATAA
Upstream 100 bases:
>100_bases TTGCAAGAGCTGACCAATGTATTATGACCTTATCTCAGACTTTGCAACAAATCAAAAAAGAGCCTGATCGTATCATTGAA TCAAATCATTGAGAAGTATT
Downstream 100 bases:
>100_bases CTACATTCCGTTCAGGCGTGGATATCCCTTGATCATTAGAAAATTATGTGTTAGCATTGCTCTCTTACCTTGGGGGGCGG TAGCTCAGTGGTTAGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MEFICPLQHARCLKKQHKIIEELFPEPFQKDHLYLKLMENSSSRDAFDKKRVLKENLVVGCQSDLYLYEVYQDGILFFFT YTKALMSSGIASLFTEVYSGETPSTILTCKPIFFQRLTPYLSFGRLNGGESLYMRMKQIAVQYLKPPQT
Sequences:
>Translated_149_residues MEFICPLQHARCLKKQHKIIEELFPEPFQKDHLYLKLMENSSSRDAFDKKRVLKENLVVGCQSDLYLYEVYQDGILFFFT YTKALMSSGIASLFTEVYSGETPSTILTCKPIFFQRLTPYLSFGRLNGGESLYMRMKQIAVQYLKPPQT >Mature_149_residues MEFICPLQHARCLKKQHKIIEELFPEPFQKDHLYLKLMENSSSRDAFDKKRVLKENLVVGCQSDLYLYEVYQDGILFFFT YTKALMSSGIASLFTEVYSGETPSTILTCKPIFFQRLTPYLSFGRLNGGESLYMRMKQIAVQYLKPPQT
Specific function: Unknown
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17371; Mature: 17371
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFICPLQHARCLKKQHKIIEELFPEPFQKDHLYLKLMENSSSRDAFDKKRVLKENLVVG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC CQSDLYLYEVYQDGILFFFTYTKALMSSGIASLFTEVYSGETPSTILTCKPIFFQRLTPY CCCCEEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH LSFGRLNGGESLYMRMKQIAVQYLKPPQT HHHHCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEFICPLQHARCLKKQHKIIEELFPEPFQKDHLYLKLMENSSSRDAFDKKRVLKENLVVG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC CQSDLYLYEVYQDGILFFFTYTKALMSSGIASLFTEVYSGETPSTILTCKPIFFQRLTPY CCCCEEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH LSFGRLNGGESLYMRMKQIAVQYLKPPQT HHHHCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA