| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835607
GI number: 15835607
Start: 87724
End: 88731
Strand: Reverse
Name: Not Available
Synonym: CPj0072
Alternate gene names: NA
Gene position: 88731-87724 (Counterclockwise)
Preceding gene: 15835620
Following gene: 15835606
Centisome position: 7.23
GC content: 37.8
Gene sequence:
>1008_bases ATGTCTACTCCACTATCTTCTGGAGGAATTTCGCCTTCTGACCAATACGTTCCTCAAGAACTATTTTGTGACAGACTGAG CTCTTCTAGATCGAACTCTCCTGATTCAAATGCTTCAGGGGACTCTCCTATAGTCAGCCCTCCTATTTCAGCGTTAGTTG CATTAACTGATCTGAAATTAGTTCCTTATAATCAAAATTCATTTTCTTGGACAACTCGTTTAAAAAACGCGGTTGAAAAA ATTGGTTTATTCCTCCAAAGGAATTGGAAATATATATTACTTTATATTTTAGCTTGGGCATTAATTTTAGTATGTCATCA TACGGTTGCTTTAACTCTAACAATTTGGTTAGGGGTGGGTCTAGGGATTGGCGTTGTTTTTGGCATTTTTACAGCGACAT GTTTAGATAAAGAGAACAAGCATAGGCATGTAAACAGTCTATGGAATTTGATAAACCATGGAATTTTGCAATTAGATCCG AACGGAACACGACAAATTCTTTTAGCCACGATGATAGCCTCTATTTCAGCGTTGATTTATGCGGTTCCTCAGGCTGTTGG TCTTGTTATAGGTTTTTCCATTGGAAATCAATTAAGTATTAATACTGTTTATGGGGCGCGCTTAGGAGATGAGGCTACTT ATGCTATTGATCGCAAGGCCCACAAAAAACGAATAGAGAACATTGAGCAAGCGATCAACCAGCATCAAATCATCAAGCAC CAAATGATCAATCAAAAGCAGTTGAATGCGCTTATAGAGATAAATCGCAACAACCAAACGGATCCTGCCACAGCGAATCT TTTAGCTTCTTTGAAACTAAACTTAAATCAGCCTATGCCCTATTGTTTTTCGATGCCAGAATGTGGTGTAACTAGCTCAT ACCTTGACTTGAATAACAACAGTCCTGATGATATTATTGCAAGAGCTGACCAATGTATTATGACCTTATCTCAGACTTTG CAACAAATCAAAAAAGAGCCTGATCGTATCATTGAATCAAATCATTGA
Upstream 100 bases:
>100_bases AGTAAACTAGAGGGGCTATAGAAGCACAAAAACCTCTGTTTACAAAGAAAAAGTCCTTATTTTAATATAGTGCTTATTGT TTTATTTTTTTCACTATCGA
Downstream 100 bases:
>100_bases GAAGTATTTTGGAATTTATCTGTCCTCTGCAACACGCTAGGTGTTTAAAAAAACAGCATAAAATTATTGAGGAGCTATTT CCAGAACCTTTTCAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSTPLSSGGISPSDQYVPQELFCDRLSSSRSNSPDSNASGDSPIVSPPISALVALTDLKLVPYNQNSFSWTTRLKNAVEK IGLFLQRNWKYILLYILAWALILVCHHTVALTLTIWLGVGLGIGVVFGIFTATCLDKENKHRHVNSLWNLINHGILQLDP NGTRQILLATMIASISALIYAVPQAVGLVIGFSIGNQLSINTVYGARLGDEATYAIDRKAHKKRIENIEQAINQHQIIKH QMINQKQLNALIEINRNNQTDPATANLLASLKLNLNQPMPYCFSMPECGVTSSYLDLNNNSPDDIIARADQCIMTLSQTL QQIKKEPDRIIESNH
Sequences:
>Translated_335_residues MSTPLSSGGISPSDQYVPQELFCDRLSSSRSNSPDSNASGDSPIVSPPISALVALTDLKLVPYNQNSFSWTTRLKNAVEK IGLFLQRNWKYILLYILAWALILVCHHTVALTLTIWLGVGLGIGVVFGIFTATCLDKENKHRHVNSLWNLINHGILQLDP NGTRQILLATMIASISALIYAVPQAVGLVIGFSIGNQLSINTVYGARLGDEATYAIDRKAHKKRIENIEQAINQHQIIKH QMINQKQLNALIEINRNNQTDPATANLLASLKLNLNQPMPYCFSMPECGVTSSYLDLNNNSPDDIIARADQCIMTLSQTL QQIKKEPDRIIESNH >Mature_334_residues STPLSSGGISPSDQYVPQELFCDRLSSSRSNSPDSNASGDSPIVSPPISALVALTDLKLVPYNQNSFSWTTRLKNAVEKI GLFLQRNWKYILLYILAWALILVCHHTVALTLTIWLGVGLGIGVVFGIFTATCLDKENKHRHVNSLWNLINHGILQLDPN GTRQILLATMIASISALIYAVPQAVGLVIGFSIGNQLSINTVYGARLGDEATYAIDRKAHKKRIENIEQAINQHQIIKHQ MINQKQLNALIEINRNNQTDPATANLLASLKLNLNQPMPYCFSMPECGVTSSYLDLNNNSPDDIIARADQCIMTLSQTLQ QIKKEPDRIIESNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37066; Mature: 36935
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLSSGGISPSDQYVPQELFCDRLSSSRSNSPDSNASGDSPIVSPPISALVALTDLKL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEE VPYNQNSFSWTTRLKNAVEKIGLFLQRNWKYILLYILAWALILVCHHTVALTLTIWLGVG EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIGVVFGIFTATCLDKENKHRHVNSLWNLINHGILQLDPNGTRQILLATMIASISALIY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH AVPQAVGLVIGFSIGNQLSINTVYGARLGDEATYAIDRKAHKKRIENIEQAINQHQIIKH HHHHHHHHHHEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMINQKQLNALIEINRNNQTDPATANLLASLKLNLNQPMPYCFSMPECGVTSSYLDLNNN HHHCHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEECCCC SPDDIIARADQCIMTLSQTLQQIKKEPDRIIESNH CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC >Mature Secondary Structure STPLSSGGISPSDQYVPQELFCDRLSSSRSNSPDSNASGDSPIVSPPISALVALTDLKL CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEE VPYNQNSFSWTTRLKNAVEKIGLFLQRNWKYILLYILAWALILVCHHTVALTLTIWLGVG EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIGVVFGIFTATCLDKENKHRHVNSLWNLINHGILQLDPNGTRQILLATMIASISALIY HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH AVPQAVGLVIGFSIGNQLSINTVYGARLGDEATYAIDRKAHKKRIENIEQAINQHQIIKH HHHHHHHHHHEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMINQKQLNALIEINRNNQTDPATANLLASLKLNLNQPMPYCFSMPECGVTSSYLDLNNN HHHCHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEECCCC SPDDIIARADQCIMTLSQTLQQIKKEPDRIIESNH CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA