Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835604

GI number: 15835604

Start: 84004

End: 84579

Strand: Reverse

Name: Not Available

Synonym: CPj0068

Alternate gene names: NA

Gene position: 84579-84004 (Counterclockwise)

Preceding gene: 15835606

Following gene: 15835590

Centisome position: 6.9

GC content: 36.11

Gene sequence:

>576_bases
ATGATTAAGAAATTTTTTATTTATAGTTTAATTTTCTCCTGCAGTTTCTCCGCTCCCCTAAAAGGCATTTGCAATGAGGA
TGTCTCTTCTCAGTCCAGAATTGAGGAGGATCCTGAAGTTTTAATAACACAACTCAATGAGCTGATTGAAACCCCAATCG
AAGAGGGCAAAGAGATACGTAATGAACTACAAGCAATTTCCGACGGGCAAAAAAGTTCGGAAGAGATTGAGGAAAGTTGT
GGTACTTCTGACTCAGAAGGTCTTTCTGAAAAGACTGATAAAGAGTCTTCTAATGAATATGTCTTAGATTTTTTCGATAG
CATGGTTCAAAGATTAGAGGGCATTTCTAAGATGTGTCAATCTGGACAAGTTGCCCAAATTATCGATTGTTTTAATCGTG
AATTTGACATTCGGAACCGCGAATTGGAGTTGAAAAATCGCGAATTAGAGCTCCGAGAGAAGGATTTAGAGTTTAAAAAG
TCCATTTTAGATTGGAATAAAGAAAAAGTAAGCCGCGAGCTAGCATTTCAACGTGAACAAGATATTAAACAAACTCTTAT
GCTATTAAAAAAATAA

Upstream 100 bases:

>100_bases
CTATTCTTTTTTTTATTCACAAATTTCTTTTGTATTTTGATTTTTATATTTCTATAATACCATTAAAATCGATTTATTAA
ATTAATTACTTTAAAGTTTT

Downstream 100 bases:

>100_bases
ACTAGAGAGAAAATGTTCCATAACATCTTGGAACATTTTCTTTTGATCTCTCCTCATGAAATTTAGATAATCTAGAGTAT
CTAAGAACGGAGAGTCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIETPIEEGKEIRNELQAISDGQKSSEEIEESC
GTSDSEGLSEKTDKESSNEYVLDFFDSMVQRLEGISKMCQSGQVAQIIDCFNREFDIRNRELELKNRELELREKDLEFKK
SILDWNKEKVSRELAFQREQDIKQTLMLLKK

Sequences:

>Translated_191_residues
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIETPIEEGKEIRNELQAISDGQKSSEEIEESC
GTSDSEGLSEKTDKESSNEYVLDFFDSMVQRLEGISKMCQSGQVAQIIDCFNREFDIRNRELELKNRELELREKDLEFKK
SILDWNKEKVSRELAFQREQDIKQTLMLLKK
>Mature_191_residues
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIETPIEEGKEIRNELQAISDGQKSSEEIEESC
GTSDSEGLSEKTDKESSNEYVLDFFDSMVQRLEGISKMCQSGQVAQIIDCFNREFDIRNRELELKNRELELREKDLEFKK
SILDWNKEKVSRELAFQREQDIKQTLMLLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22209; Mature: 22209

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIETPIEEGKEIR
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHH
NELQAISDGQKSSEEIEESCGTSDSEGLSEKTDKESSNEYVLDFFDSMVQRLEGISKMCQ
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGQVAQIIDCFNREFDIRNRELELKNRELELREKDLEFKKSILDWNKEKVSRELAFQREQ
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DIKQTLMLLKK
HHHHHHHHHCC
>Mature Secondary Structure
MIKKFFIYSLIFSCSFSAPLKGICNEDVSSQSRIEEDPEVLITQLNELIETPIEEGKEIR
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHH
NELQAISDGQKSSEEIEESCGTSDSEGLSEKTDKESSNEYVLDFFDSMVQRLEGISKMCQ
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGQVAQIIDCFNREFDIRNRELELKNRELELREKDLEFKKSILDWNKEKVSRELAFQREQ
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DIKQTLMLLKK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA