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The map label for this gene is pmp_5_1

Identifier: 15835555

GI number: 15835555

Start: 27193

End: 28677

Strand: Direct

Name: pmp_5_1

Synonym: CPj0018

Alternate gene names: 15835555

Gene position: 27193-28677 (Clockwise)

Preceding gene: 15835554

Following gene: 15835556

Centisome position: 2.22

GC content: 44.31

Gene sequence:

>1485_bases
ATGAAGACTTCAGTTTCTATGTTGTTGGCCCTGCTTTGCTCGGGGGCTAGCTCTATTGTACTCCATGCCGCAACCACTCC
ACTAAATCCTGAAGATGGGTTTATTGGGGAGGGCAATACAAATACTTTTTCTCCGAAATCTACAACGGATGCTGCAGGAA
CTACCTACTCTCTCACAGGAGAGGTTCTGTATATAGATCCGGGGAAAGGTGGTTCAATTACAGGAACTTGCTTTGTAGAA
ACTGCTGGCGATCTTACATTTTTAGGTAATGGAAATACCCTAAAGTTCCTGTCGGTAGATGCAGGTGCTAATATCGCGGT
TGCTCATGTACAAGGAAGTAAGAATTTAAGCTTCACAGATTTCCTTTCTCTGGTGATCACAGAATCTCCAAAATCCGCTG
TTACTACAGGAAAAGGTAGCCTAGTCAGTTTAGGTGCAGTCCAACTGCAAGATATAAACACTCTAGTTCTTACAAGCAAT
GCCTCTGTCGAAGATGGTGGCGTGATTAAAGGAAACTCCTGCTTGATTCAGGGAATCAAAAATAGTGCGATTTTTGGACA
AAATACATCTTCGAAAAAAGGAGGGGCGATCTCCACGACTCAAGGACTTACCATAGAGAATAACTTAGGGACGCTAAAGT
TCAATGAAAACAAAGCAGTGACCTCAGGAGGCGCCTTAGATTTAGGAGCCGCGTCTACATTCACTGCGAACCATGAGTTG
ATATTTTCACAAAATAAGACTTCTGGGAATGCTGCAAATGGCGGAGCCATAAATTGCTCAGGGGACCTTACATTTACTGA
TAACACTTCTTTGTTACTTCAAGAAAATAGCACAATGCAGGATGGTGGAGCTTTGTGTAGCACAGGAACCATAAGCATTA
CCGGTAGTGATTCTATCAATGTGATAGGAAATACTTCAGGACAAAAAGGAGGAGCGATTTCTGCAGCTTCTCTCAAGATT
TTGGGAGGGCAGGGAGGCGCTCTCTTTTCTAATAACGTAGTGACTCATGCCACCCCTCTAGGAGGTGCCATTTTTATCAA
CACAGGAGGATCCTTGCAGCTCTTCACTCAAGGAGGGGATATCGTATTCGAGGGGAATCAGGTCACTACAACAGCTCCAA
ATGCTACCACTAAGAGAAATGTAATTCACCTCGAGAGCACCGCGAAGTGGACGGGACTTGCTGCAAGTCAAGGTAACGCT
ATCTATTTCTATGATCCCATTACCACCAACGATACGGGAGCAAGCGATAACTTACGTATCAATGAGGTCAGTGCAAATCA
AAAGCTCTCGGGATCTATAGTATTTTCTGGAGAGAGATTGTCGACAGCAGAAGCTATAGCTGAAAATCTTACTTCGAGGA
TCAACCAGCCTGTCACTTTAGTAGAGGGGAGCTTAGTACTTAAACAGGGAGTGACCTTGATCACACAGGGATTCTCGCAG
GAGCCAGAATCCACGCTTCTTTTGGATCTGGGGACCTCATTATAA

Upstream 100 bases:

>100_bases
AAATGCTTCTAGTCTAGGGGAACTTTTTTCTATTTCTACGAAGGGAGTGTCTTGTCTAGAACTCCATAGGGAGATCGCAC
GCTAAATATGAGAATATAAT

Downstream 100 bases:

>100_bases
GCTTCTACAGAAGATATTGTCATCACAAATTTATCTATAAATGCCGATACCATTTACGGAAAGAATCCTATCAATATTGT
AGCTTCAGCAGCGAATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein 11; Polymorphic membrane protein 8 [H]

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKTSVSMLLALLCSGASSIVLHAATTPLNPEDGFIGEGNTNTFSPKSTTDAAGTTYSLTGEVLYIDPGKGGSITGTCFVE
TAGDLTFLGNGNTLKFLSVDAGANIAVAHVQGSKNLSFTDFLSLVITESPKSAVTTGKGSLVSLGAVQLQDINTLVLTSN
ASVEDGGVIKGNSCLIQGIKNSAIFGQNTSSKKGGAISTTQGLTIENNLGTLKFNENKAVTSGGALDLGAASTFTANHEL
IFSQNKTSGNAANGGAINCSGDLTFTDNTSLLLQENSTMQDGGALCSTGTISITGSDSINVIGNTSGQKGGAISAASLKI
LGGQGGALFSNNVVTHATPLGGAIFINTGGSLQLFTQGGDIVFEGNQVTTTAPNATTKRNVIHLESTAKWTGLAASQGNA
IYFYDPITTNDTGASDNLRINEVSANQKLSGSIVFSGERLSTAEAIAENLTSRINQPVTLVEGSLVLKQGVTLITQGFSQ
EPESTLLLDLGTSL

Sequences:

>Translated_494_residues
MKTSVSMLLALLCSGASSIVLHAATTPLNPEDGFIGEGNTNTFSPKSTTDAAGTTYSLTGEVLYIDPGKGGSITGTCFVE
TAGDLTFLGNGNTLKFLSVDAGANIAVAHVQGSKNLSFTDFLSLVITESPKSAVTTGKGSLVSLGAVQLQDINTLVLTSN
ASVEDGGVIKGNSCLIQGIKNSAIFGQNTSSKKGGAISTTQGLTIENNLGTLKFNENKAVTSGGALDLGAASTFTANHEL
IFSQNKTSGNAANGGAINCSGDLTFTDNTSLLLQENSTMQDGGALCSTGTISITGSDSINVIGNTSGQKGGAISAASLKI
LGGQGGALFSNNVVTHATPLGGAIFINTGGSLQLFTQGGDIVFEGNQVTTTAPNATTKRNVIHLESTAKWTGLAASQGNA
IYFYDPITTNDTGASDNLRINEVSANQKLSGSIVFSGERLSTAEAIAENLTSRINQPVTLVEGSLVLKQGVTLITQGFSQ
EPESTLLLDLGTSL
>Mature_494_residues
MKTSVSMLLALLCSGASSIVLHAATTPLNPEDGFIGEGNTNTFSPKSTTDAAGTTYSLTGEVLYIDPGKGGSITGTCFVE
TAGDLTFLGNGNTLKFLSVDAGANIAVAHVQGSKNLSFTDFLSLVITESPKSAVTTGKGSLVSLGAVQLQDINTLVLTSN
ASVEDGGVIKGNSCLIQGIKNSAIFGQNTSSKKGGAISTTQGLTIENNLGTLKFNENKAVTSGGALDLGAASTFTANHEL
IFSQNKTSGNAANGGAINCSGDLTFTDNTSLLLQENSTMQDGGALCSTGTISITGSDSINVIGNTSGQKGGAISAASLKI
LGGQGGALFSNNVVTHATPLGGAIFINTGGSLQLFTQGGDIVFEGNQVTTTAPNATTKRNVIHLESTAKWTGLAASQGNA
IYFYDPITTNDTGASDNLRINEVSANQKLSGSIVFSGERLSTAEAIAENLTSRINQPVTLVEGSLVLKQGVTLITQGFSQ
EPESTLLLDLGTSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 50229; Mature: 50229

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSVSMLLALLCSGASSIVLHAATTPLNPEDGFIGEGNTNTFSPKSTTDAAGTTYSLTG
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE
EVLYIDPGKGGSITGTCFVETAGDLTFLGNGNTLKFLSVDAGANIAVAHVQGSKNLSFTD
EEEEEECCCCCCEEEEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHH
FLSLVITESPKSAVTTGKGSLVSLGAVQLQDINTLVLTSNASVEDGGVIKGNSCLIQGIK
EEEEEEECCCCHHEECCCCCEEEECEEEEECCEEEEEECCCCCCCCCEEECCCEEEEECC
NSAIFGQNTSSKKGGAISTTQGLTIENNLGTLKFNENKAVTSGGALDLGAASTFTANHEL
CCEEECCCCCCCCCCEEEECCCEEEECCCEEEEECCCCEEECCCCEECCCCEEEECCCEE
IFSQNKTSGNAANGGAINCSGDLTFTDNTSLLLQENSTMQDGGALCSTGTISITGSDSIN
EEECCCCCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCEEECCEEEEECCCCEE
VIGNTSGQKGGAISAASLKILGGQGGALFSNNVVTHATPLGGAIFINTGGSLQLFTQGGD
EEECCCCCCCCEEEEEEEEEEECCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCCC
IVFEGNQVTTTAPNATTKRNVIHLESTAKWTGLAASQGNAIYFYDPITTNDTGASDNLRI
EEEECCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEE
NEVSANQKLSGSIVFSGERLSTAEAIAENLTSRINQPVTLVEGSLVLKQGVTLITQGFSQ
EEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEEECCCCC
EPESTLLLDLGTSL
CCCCEEEEEECCCC
>Mature Secondary Structure
MKTSVSMLLALLCSGASSIVLHAATTPLNPEDGFIGEGNTNTFSPKSTTDAAGTTYSLTG
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE
EVLYIDPGKGGSITGTCFVETAGDLTFLGNGNTLKFLSVDAGANIAVAHVQGSKNLSFTD
EEEEEECCCCCCEEEEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHH
FLSLVITESPKSAVTTGKGSLVSLGAVQLQDINTLVLTSNASVEDGGVIKGNSCLIQGIK
EEEEEEECCCCHHEECCCCCEEEECEEEEECCEEEEEECCCCCCCCCEEECCCEEEEECC
NSAIFGQNTSSKKGGAISTTQGLTIENNLGTLKFNENKAVTSGGALDLGAASTFTANHEL
CCEEECCCCCCCCCCEEEECCCEEEECCCEEEEECCCCEEECCCCEECCCCEEEECCCEE
IFSQNKTSGNAANGGAINCSGDLTFTDNTSLLLQENSTMQDGGALCSTGTISITGSDSIN
EEECCCCCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCEEECCEEEEECCCCEE
VIGNTSGQKGGAISAASLKILGGQGGALFSNNVVTHATPLGGAIFINTGGSLQLFTQGGD
EEECCCCCCCCEEEEEEEEEEECCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCCC
IVFEGNQVTTTAPNATTKRNVIHLESTAKWTGLAASQGNAIYFYDPITTNDTGASDNLRI
EEEECCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEE
NEVSANQKLSGSIVFSGERLSTAEAIAENLTSRINQPVTLVEGSLVLKQGVTLITQGFSQ
EEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEEECCCCC
EPESTLLLDLGTSL
CCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10539856; 10192388; 10684935; 10871362 [H]