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The map label for this gene is pmp_5_2

Identifier: 15835556

GI number: 15835556

Start: 28693

End: 30030

Strand: Direct

Name: pmp_5_2

Synonym: CPj0019

Alternate gene names: 15835556

Gene position: 28693-30030 (Clockwise)

Preceding gene: 15835555

Following gene: 15835567

Centisome position: 2.34

GC content: 42.9

Gene sequence:

>1338_bases
ATTGTCATCACAAATTTATCTATAAATGCCGATACCATTTACGGAAAGAATCCTATCAATATTGTAGCTTCAGCAGCGAA
TAAGAACATTACCCTAACAGGAACCTTAGCACTTGTAAATGCAGATGGAGCTTTCTATGAGAACCATACCTTGCAAGACT
CTCAAGACTATAGCTTTGTAAAGTTATCTCCAGGAGCGGGAGGGACTATAATTACTCAAGATGCTTCTCAGAAGCCTCTT
GAAGTAGCTCCTTCTAGACCACATTATGGCTATCAAGGACATTGGAATGTGCAAGTCATCCCAGGAACGGGAACTCAACC
GAGCCAGGCAAATTTAGAATGGGTGCGGACAGGATACCTTCCGAATCCCGAACGGCAAGGATCTTTAGTTCCCAATAGCC
TGTGGGGTTCTTTTGTTGATCAGCGTGCTATCCAAGAAATCATGGTAAATAGTAGCCAAATCTTATGTCAGGAACGGGGA
GTCTGGGGAGCTGGAATTGCTAATTTCCTACATAGAGATAAAATTAATGAGCACGGCTATCGCCATAGCGGTGTCGGTTA
TCTTGTGGGAGTTGGCACTCATGCTTTTTCTGATGCTACGATAAATGCGGCTTTTTGCCAGCTCTTCAGTAGAGATAAAG
ACTACGTAGTATCCAAAAATCATGGAACTAGCTACTCAGGGGTCGTATTTCTTGAGGATACCCTAGAGTTTAGAAGTCCA
CAGGGATTCTATACTGATAGCTCCTCAGAAGCTTGCTGTAACCAAGTCGTCACTATAGATATGCAGTTGTCTTACAGCCA
TAGAAATAATGATATGAAAACCAAATACACGACATATCCAGAAGCTCAGGGATCTTGGGCAAATGATGTTTTTGGTCTTG
AGTTTGGAGCGACTACATACTACTACCCTAACAGTACTTTTTTATTTGATTACTACTCTCCGTTTCTCAGGCTGCAGTGC
ACCTATGCTCACCAGGAAGACTTCAAAGAGACAGGAGGTGAGGTTCGTCACTTTACTAGCGGAGATCTTTTCAATTTAGC
AGTTCCTATTGGCGTGAAGTTTGAGAGATTTTCAGACTGTAAAAGGGGATCTTATGAACTTACCTTTGCTTATGTTCCTG
ATGTGATTCGCAAAGATCCCAAGAGCACGGCAACATTGGCTAGTGGAGCTACGTGGAGCACCCACGGAAACAATCTCTCC
AGACAAGGATTACAACTGCGTTTAGGGAACCACTGTCTCATAAATCCTGGAATTGAGGTGTTCAGTCACGGAGCTATTGA
ATTGCGGGGATCCTCTCGTAATTATAACATCAATCTCGGGGGTAAATACCGATTTTAA

Upstream 100 bases:

>100_bases
TAAACAGGGAGTGACCTTGATCACACAGGGATTCTCGCAGGAGCCAGAATCCACGCTTCTTTTGGATCTGGGGACCTCAT
TATAAGCTTCTACAGAAGAT

Downstream 100 bases:

>100_bases
TAGGGAACTGAGAGTTCCTTATTGTAGAGAGTATTTACAAGGATTTTGAGACGAAAGAGATTTCTTGTTGTAGGTATCTC
TCCACAGGGTCTAGTTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein 5; Polymorphic membrane protein 10 [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MVITNLSINADTIYGKNPINIVASAANKNITLTGTLALVNADGAFYENHTLQDSQDYSFVKLSPGAGGTIITQDASQKPL
EVAPSRPHYGYQGHWNVQVIPGTGTQPSQANLEWVRTGYLPNPERQGSLVPNSLWGSFVDQRAIQEIMVNSSQILCQERG
VWGAGIANFLHRDKINEHGYRHSGVGYLVGVGTHAFSDATINAAFCQLFSRDKDYVVSKNHGTSYSGVVFLEDTLEFRSP
QGFYTDSSSEACCNQVVTIDMQLSYSHRNNDMKTKYTTYPEAQGSWANDVFGLEFGATTYYYPNSTFLFDYYSPFLRLQC
TYAHQEDFKETGGEVRHFTSGDLFNLAVPIGVKFERFSDCKRGSYELTFAYVPDVIRKDPKSTATLASGATWSTHGNNLS
RQGLQLRLGNHCLINPGIEVFSHGAIELRGSSRNYNINLGGKYRF

Sequences:

>Translated_445_residues
MVITNLSINADTIYGKNPINIVASAANKNITLTGTLALVNADGAFYENHTLQDSQDYSFVKLSPGAGGTIITQDASQKPL
EVAPSRPHYGYQGHWNVQVIPGTGTQPSQANLEWVRTGYLPNPERQGSLVPNSLWGSFVDQRAIQEIMVNSSQILCQERG
VWGAGIANFLHRDKINEHGYRHSGVGYLVGVGTHAFSDATINAAFCQLFSRDKDYVVSKNHGTSYSGVVFLEDTLEFRSP
QGFYTDSSSEACCNQVVTIDMQLSYSHRNNDMKTKYTTYPEAQGSWANDVFGLEFGATTYYYPNSTFLFDYYSPFLRLQC
TYAHQEDFKETGGEVRHFTSGDLFNLAVPIGVKFERFSDCKRGSYELTFAYVPDVIRKDPKSTATLASGATWSTHGNNLS
RQGLQLRLGNHCLINPGIEVFSHGAIELRGSSRNYNINLGGKYRF
>Mature_445_residues
MVITNLSINADTIYGKNPINIVASAANKNITLTGTLALVNADGAFYENHTLQDSQDYSFVKLSPGAGGTIITQDASQKPL
EVAPSRPHYGYQGHWNVQVIPGTGTQPSQANLEWVRTGYLPNPERQGSLVPNSLWGSFVDQRAIQEIMVNSSQILCQERG
VWGAGIANFLHRDKINEHGYRHSGVGYLVGVGTHAFSDATINAAFCQLFSRDKDYVVSKNHGTSYSGVVFLEDTLEFRSP
QGFYTDSSSEACCNQVVTIDMQLSYSHRNNDMKTKYTTYPEAQGSWANDVFGLEFGATTYYYPNSTFLFDYYSPFLRLQC
TYAHQEDFKETGGEVRHFTSGDLFNLAVPIGVKFERFSDCKRGSYELTFAYVPDVIRKDPKSTATLASGATWSTHGNNLS
RQGLQLRLGNHCLINPGIEVFSHGAIELRGSSRNYNINLGGKYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR006626
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 49353; Mature: 49353

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVITNLSINADTIYGKNPINIVASAANKNITLTGTLALVNADGAFYENHTLQDSQDYSFV
CEEEEEEECCCEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCEE
KLSPGAGGTIITQDASQKPLEVAPSRPHYGYQGHWNVQVIPGTGTQPSQANLEWVRTGYL
EECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCC
PNPERQGSLVPNSLWGSFVDQRAIQEIMVNSSQILCQERGVWGAGIANFLHRDKINEHGY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCHHHCCC
RHSGVGYLVGVGTHAFSDATINAAFCQLFSRDKDYVVSKNHGTSYSGVVFLEDTLEFRSP
EECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCHHHCCC
QGFYTDSSSEACCNQVVTIDMQLSYSHRNNDMKTKYTTYPEAQGSWANDVFGLEFGATTY
CCCCCCCCCHHHCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEE
YYPNSTFLFDYYSPFLRLQCTYAHQEDFKETGGEVRHFTSGDLFNLAVPIGVKFERFSDC
ECCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEEEEECCEEEHHHHCC
KRGSYELTFAYVPDVIRKDPKSTATLASGATWSTHGNNLSRQGLQLRLGNHCLINPGIEV
CCCCEEEEEEECCHHHHCCCCCCEEEECCCEEECCCCCCCCCCEEEEECCEEEECCCHHH
FSHGAIELRGSSRNYNINLGGKYRF
HCCCEEEEECCCCEEEEECCCEECC
>Mature Secondary Structure
MVITNLSINADTIYGKNPINIVASAANKNITLTGTLALVNADGAFYENHTLQDSQDYSFV
CEEEEEEECCCEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCEE
KLSPGAGGTIITQDASQKPLEVAPSRPHYGYQGHWNVQVIPGTGTQPSQANLEWVRTGYL
EECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCC
PNPERQGSLVPNSLWGSFVDQRAIQEIMVNSSQILCQERGVWGAGIANFLHRDKINEHGY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCHHHCCC
RHSGVGYLVGVGTHAFSDATINAAFCQLFSRDKDYVVSKNHGTSYSGVVFLEDTLEFRSP
EECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCHHHCCC
QGFYTDSSSEACCNQVVTIDMQLSYSHRNNDMKTKYTTYPEAQGSWANDVFGLEFGATTY
CCCCCCCCCHHHCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEE
YYPNSTFLFDYYSPFLRLQCTYAHQEDFKETGGEVRHFTSGDLFNLAVPIGVKFERFSDC
ECCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEEEEECCEEEHHHHCC
KRGSYELTFAYVPDVIRKDPKSTATLASGATWSTHGNNLSRQGLQLRLGNHCLINPGIEV
CCCCEEEEEEECCHHHHCCCCCCEEEECCCEEECCCCCCCCCCEEEEECCEEEECCCHHH
FSHGAIELRGSSRNYNINLGGKYRF
HCCCEEEEECCCCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10539856; 10684935; 10871362; 9864239 [H]