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The map label for this gene is hemD

Identifier: 15835332

GI number: 15835332

Start: 855436

End: 856110

Strand: Direct

Name: hemD

Synonym: TC0717

Alternate gene names: NA

Gene position: 855436-856110 (Clockwise)

Preceding gene: 15835327

Following gene: 15835333

Centisome position: 79.73

GC content: 40.74

Gene sequence:

>675_bases
ATGGCACTGTATTTAGGGCTCAATCCATCCTTTGCTAAGCAATATTCTGCTATTTTTCAGCCAATTATTCGCATAATTCC
TTTTTCAAAGCATGCCCCTCAGATGCGTCAAGCGAGGCAATTCCTTGTATCTGCTTCCCATGTTTTATTAACAAGCCCTT
CATCCACCCACTGTTTTTTTTCTTCCATTAAGAAAACAGTTTCTCCGTCTGCGTTAATGAGCAAATGCTTCGTTACTATT
GGAGAAGCTACCTCTTCTCGCGTACGCGCCCACCTTCCTAAAGCTAATATTGTGCAAGTTCCATTCCCTCAATCAGAAGC
TTTTCAACCTATTCTATCCTCCCTCCCATCCAATACCTCTATATTATATCCTCATTCTTCCCTTGCTCGACCCATTATCC
GATCTCTGCTTAACAAACTACAGTATCCCTTCTTTTCCTATTCCCACTACACTGTCAAACCTATCAAACTTTCTCTAAAC
ATATTTTCCCCACACAAAATTATTATTCTTACCAGTCCTTCGATTGTTCGCGCATATGCGAAATTATTCCCATCCCTTCC
TAGTAAAGAACACTGGTGCCTAGGTGAAATCAGCGCAGAGGAATTTAAAAAAATATTCCACTGCCCTCCATCTAAAATTC
TCTTCCCAATAAAGGAATCCCAAGGCTGTTGCTAA

Upstream 100 bases:

>100_bases
CCGCAAAAGTCAAGAAGCTTCCTACCAACAAAAAGCTTCTCTTCAATTCAAAAAAAACTCTAACATATCACTTTGAAACA
GGGGCATCTCCTCGATCCAT

Downstream 100 bases:

>100_bases
CAATCTTTCTGTTTATTTTAATAAATGCTTCTTCCAGAATTAGCAGAGAAAGTTCTTTTTTAAATATAAACACATGTCTG
AACCATCCTCTTGTTTTGTT

Product: uroporphyrinogen-III synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MALYLGLNPSFAKQYSAIFQPIIRIIPFSKHAPQMRQARQFLVSASHVLLTSPSSTHCFFSSIKKTVSPSALMSKCFVTI
GEATSSRVRAHLPKANIVQVPFPQSEAFQPILSSLPSNTSILYPHSSLARPIIRSLLNKLQYPFFSYSHYTVKPIKLSLN
IFSPHKIIILTSPSIVRAYAKLFPSLPSKEHWCLGEISAEEFKKIFHCPPSKILFPIKESQGCC

Sequences:

>Translated_224_residues
MALYLGLNPSFAKQYSAIFQPIIRIIPFSKHAPQMRQARQFLVSASHVLLTSPSSTHCFFSSIKKTVSPSALMSKCFVTI
GEATSSRVRAHLPKANIVQVPFPQSEAFQPILSSLPSNTSILYPHSSLARPIIRSLLNKLQYPFFSYSHYTVKPIKLSLN
IFSPHKIIILTSPSIVRAYAKLFPSLPSKEHWCLGEISAEEFKKIFHCPPSKILFPIKESQGCC
>Mature_223_residues
ALYLGLNPSFAKQYSAIFQPIIRIIPFSKHAPQMRQARQFLVSASHVLLTSPSSTHCFFSSIKKTVSPSALMSKCFVTIG
EATSSRVRAHLPKANIVQVPFPQSEAFQPILSSLPSNTSILYPHSSLARPIIRSLLNKLQYPFFSYSHYTVKPIKLSLNI
FSPHKIIILTSPSIVRAYAKLFPSLPSKEHWCLGEISAEEFKKIFHCPPSKILFPIKESQGCC

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25076; Mature: 24945

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYLGLNPSFAKQYSAIFQPIIRIIPFSKHAPQMRQARQFLVSASHVLLTSPSSTHCFF
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHH
SSIKKTVSPSALMSKCFVTIGEATSSRVRAHLPKANIVQVPFPQSEAFQPILSSLPSNTS
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCE
ILYPHSSLARPIIRSLLNKLQYPFFSYSHYTVKPIKLSLNIFSPHKIIILTSPSIVRAYA
EECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCEEEEEEECCHHHHHHH
KLFPSLPSKEHWCLGEISAEEFKKIFHCPPSKILFPIKESQGCC
HHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
ALYLGLNPSFAKQYSAIFQPIIRIIPFSKHAPQMRQARQFLVSASHVLLTSPSSTHCFF
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHH
SSIKKTVSPSALMSKCFVTIGEATSSRVRAHLPKANIVQVPFPQSEAFQPILSSLPSNTS
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCE
ILYPHSSLARPIIRSLLNKLQYPFFSYSHYTVKPIKLSLNIFSPHKIIILTSPSIVRAYA
EECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCEEEEEEECCHHHHHHH
KLFPSLPSKEHWCLGEISAEEFKKIFHCPPSKILFPIKESQGCC
HHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA