Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835151

GI number: 15835151

Start: 643257

End: 644027

Strand: Direct

Name: Not Available

Synonym: TC0533

Alternate gene names: NA

Gene position: 643257-644027 (Clockwise)

Preceding gene: 15835150

Following gene: 15835152

Centisome position: 59.95

GC content: 40.08

Gene sequence:

>771_bases
ATGACTTTCTCCGTAGCTTTTTCCCCTTGTCCAAATGATATTTTTTTGTTTAGGTCTTTCTTGGAAAAACATGAAGGGGC
CCCTTCTTTGCGCCAAATTATGATCGCGGATATAGCCTCTTTAAATCACCTTGCTTTAGAAACTCGATTCTCTTTAATTA
AAATCTCCGCGAGCCTATATCCCCGAATTGCAGATGCCTATCATGTTTTGGATGTTGGAACCACTTTAGGGCACAAGATA
GGTCCGTTGGTTCTTTCTAAACATCCTGATAAGCTTTTAAGAACTCTCGCTACTCCAGGTGAAACAACAACGGCACATGC
TCTTTGCCGACTGTTCTATCCGCAAACAGAACTAATTCCTATGAAATATCATGAGATCATCCCCGCTATCCTTGCAAATC
AGGTAGACGGTGGAGCAGTAATTCATGAAGAACGTTTCTCTTTTCCAAAAGAGTTGTGCCTTGTGGACGATCTTGGTCAA
CTTTGGGAAGAAAAGTGGCATCTTCCTTTACCTTTAGGATGTATTGCAATCTCTAAAGAGATTTCTGCTGATGACTCTTA
TCGGTTAAATTATGCCCTTCTGAGATCCTTAAGGAGATCTTTAACAGAAAGCTCTTTGGCTATTCAAAAAGCTTCTGAGT
ATTCTCGAGATAAAAATGCAGCTACTATCCAACGTTTTATTGATACTTATGTAACGGAAGAAACATTCTGTCTCTCACCT
ATCGGAAGAGAAGCTCTCTCTACATTATGGACGGCTTGTCGTAATGTTTAA

Upstream 100 bases:

>100_bases
TCCCTTCTAGTTACATTGCTTGGTTACAAAAAGGAGATTACCTGTTACAACCAGAGAATAAAGAAATTAAAGCAGCTATC
GAGGCTTATCAACAACTCAA

Downstream 100 bases:

>100_bases
ACTTCTTCTCATTTTTGCGGATCCTGTAGAGGCCTCTGAAACTCTTGCTCTTTTTCCTTTTTCCGCTCGTAGCGAATTCC
TATATTCTTACTCCACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKI
GPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQ
LWEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP
IGREALSTLWTACRNV

Sequences:

>Translated_256_residues
MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKI
GPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQ
LWEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP
IGREALSTLWTACRNV
>Mature_255_residues
TFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKIG
PLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQL
WEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSPI
GREALSTLWTACRNV

Specific function: Unknown

COG id: COG2107

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28758; Mature: 28627

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLY
CEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
PRIADAYHVLDVGTTLGHKIGPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIP
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
MKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQLWEEKWHLPLPLGCIAISKE
HHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCC
IGREALSTLWTACRNV
CCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLY
EEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
PRIADAYHVLDVGTTLGHKIGPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIP
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
MKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQLWEEKWHLPLPLGCIAISKE
HHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCC
IGREALSTLWTACRNV
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA