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The map label for this gene is 158338601

Identifier: 158338601

GI number: 158338601

Start: 5555094

End: 5555957

Strand: Reverse

Name: 158338601

Synonym: AM1_5505

Alternate gene names: NA

Gene position: 5555957-5555094 (Counterclockwise)

Preceding gene: 158338606

Following gene: 158338600

Centisome position: 85.43

GC content: 49.88

Gene sequence:

>864_bases
ATGAGGCATCCCCTCCGTTGGATCTTTGGAAGACTAATTTTACTACTGTGTCTACTCAGTATTGGAATGACGTTCGGTGG
ACATCCGGCGTTCGCTGCCCCGGAGCAATCTACCCCACCTGCTTATACTGCTGAGATCGAGACTCAGGTAGAGAATCTAT
TTAATGCAGCCATGGAAGCCACAAACAAAGGTAACTTCGCCAAGGCAGAGCAATATTGGACCGAGGCCCTTGATTTTCTG
CCTAACAATCCTGCCATCTGGAGTAATCGAGGTAACTCCAAGATAAGCCAAGGGAAATTTGAGGCCGCGTTGGTCGACTA
TGACCGCTCCGTTGAACTTGCCCCCGAACAACCCGATGCTTATCTGAATCGGGGTGCAGTCCAGGAAGGGCTAGCCAATT
GGGAAGCTGCGATTGCTGATTACAACAAAGTAATTGAACTGGATCCAAAGGAGGCCGCTGCCTACAACAATCGTGGCAAC
GCCAAAGCAGGGCAAGGGGATTGGAATGCCGCTCTTACGGATTTTGAAACGGCCATGGAGCTATCTCCCCAGTTTGCGTT
TGCTAGAGGCAATTATGCCCTCGCGTTGTATCAAGTGGGTGAGCGGGATGAGGCCATCAAAACCATGCGAAATTTGGTTC
GCAAATATCCCCAGTTTGCCGATATGCGTGCGGCAATGACGGCAGCTTTATGGGACAAAGGCCAAATTGGGGAAGCAGAA
AGTAATTGGGTGGCTGCGATTGGATTAGATTCGCGCTATAAAGATACAGCCTGGTTAACAGAAATTCGCCGTTGGCCCCC
TGCTTTAGTTGAAAATATGGAGGGTTTTCTCACCCTATCAGGTGATAAAGGGGCCAAGAGCTGA

Upstream 100 bases:

>100_bases
CCCAGGCTTAATCACTACTCTGTTGCCCCTAACCACAAAATTCAGCGAAATCGTTACGGTAAAAGAAGGAATTTAAGTGT
CAAGGACTAATTTGCAAGCC

Downstream 100 bases:

>100_bases
ATCAAACCTCTACTTGAATTGAGTAGGTATTTGTCTTCTCTGTTGTTTTAATTGGTTATGTCTCTACAACCCGTTCAACA
GGTTTTATCAACCTTAAAAC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRHPLRWIFGRLILLLCLLSIGMTFGGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEATNKGNFAKAEQYWTEALDFL
PNNPAIWSNRGNSKISQGKFEAALVDYDRSVELAPEQPDAYLNRGAVQEGLANWEAAIADYNKVIELDPKEAAAYNNRGN
AKAGQGDWNAALTDFETAMELSPQFAFARGNYALALYQVGERDEAIKTMRNLVRKYPQFADMRAAMTAALWDKGQIGEAE
SNWVAAIGLDSRYKDTAWLTEIRRWPPALVENMEGFLTLSGDKGAKS

Sequences:

>Translated_287_residues
MRHPLRWIFGRLILLLCLLSIGMTFGGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEATNKGNFAKAEQYWTEALDFL
PNNPAIWSNRGNSKISQGKFEAALVDYDRSVELAPEQPDAYLNRGAVQEGLANWEAAIADYNKVIELDPKEAAAYNNRGN
AKAGQGDWNAALTDFETAMELSPQFAFARGNYALALYQVGERDEAIKTMRNLVRKYPQFADMRAAMTAALWDKGQIGEAE
SNWVAAIGLDSRYKDTAWLTEIRRWPPALVENMEGFLTLSGDKGAKS
>Mature_287_residues
MRHPLRWIFGRLILLLCLLSIGMTFGGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEATNKGNFAKAEQYWTEALDFL
PNNPAIWSNRGNSKISQGKFEAALVDYDRSVELAPEQPDAYLNRGAVQEGLANWEAAIADYNKVIELDPKEAAAYNNRGN
AKAGQGDWNAALTDFETAMELSPQFAFARGNYALALYQVGERDEAIKTMRNLVRKYPQFADMRAAMTAALWDKGQIGEAE
SNWVAAIGLDSRYKDTAWLTEIRRWPPALVENMEGFLTLSGDKGAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=207, Percent_Identity=29.4685990338164, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI32307150, Length=207, Percent_Identity=29.4685990338164, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI310123097, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI310131789, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI310110582, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=170, Percent_Identity=32.9411764705882, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115532692, Length=170, Percent_Identity=32.9411764705882, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17647755, Length=207, Percent_Identity=29.951690821256, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585827, Length=207, Percent_Identity=29.951690821256, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585829, Length=207, Percent_Identity=29.951690821256, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647123, Length=197, Percent_Identity=26.3959390862944, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 31850; Mature: 31850

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPLRWIFGRLILLLCLLSIGMTFGGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TNKGNFAKAEQYWTEALDFLPNNPAIWSNRGNSKISQGKFEAALVDYDRSVELAPEQPDA
CCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHEEEECCCCCEECCCCCCHH
YLNRGAVQEGLANWEAAIADYNKVIELDPKEAAAYNNRGNAKAGQGDWNAALTDFETAME
HHHHHHHHHHHHHHHHHHHHCHHEEEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPQFAFARGNYALALYQVGERDEAIKTMRNLVRKYPQFADMRAAMTAALWDKGQIGEAE
CCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
SNWVAAIGLDSRYKDTAWLTEIRRWPPALVENMEGFLTLSGDKGAKS
CCEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRHPLRWIFGRLILLLCLLSIGMTFGGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TNKGNFAKAEQYWTEALDFLPNNPAIWSNRGNSKISQGKFEAALVDYDRSVELAPEQPDA
CCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHEEEECCCCCEECCCCCCHH
YLNRGAVQEGLANWEAAIADYNKVIELDPKEAAAYNNRGNAKAGQGDWNAALTDFETAME
HHHHHHHHHHHHHHHHHHHHCHHEEEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPQFAFARGNYALALYQVGERDEAIKTMRNLVRKYPQFADMRAAMTAALWDKGQIGEAE
CCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
SNWVAAIGLDSRYKDTAWLTEIRRWPPALVENMEGFLTLSGDKGAKS
CCEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]