Click here to switch to the map view.

The map label for this gene is 158338600

Identifier: 158338600

GI number: 158338600

Start: 5554491

End: 5555036

Strand: Reverse

Name: 158338600

Synonym: AM1_5504

Alternate gene names: NA

Gene position: 5555036-5554491 (Counterclockwise)

Preceding gene: 158338601

Following gene: 158338599

Centisome position: 85.41

GC content: 48.17

Gene sequence:

>546_bases
ATGTCTCTACAACCCGTTCAACAGGTTTTATCAACCTTAAAACAAACCCATTGGCAGCATGAACAGGAATTTGTGCAGTT
GTTGGATACCTGGACCCAGATTGTTGGACCTGTCGTTGCGGCCCAAACTCAACCCATCCAAATTACACCGCGAAAAATAT
TGCTTGTGGCTACAACCAGTTCTGCCTGGGCTCAGAATTTGGCGTTCGAACGGAGTCGCATTCTCCATAAACTAAATACC
CAGCTCTCCTACGAGTTTACAGACATTCGTTTTTCCACGAGTCAATGGCCAAGACGATCGAACAACACCCATCGGCGTTC
TGTCCCTCCGTCGATTACACCGGCTAGTCTGCTTCCTGCTTTACCTGTTGCTCGACTGGAGCCTAGTCTCGATCCGAATG
AGGCGTTTGAACGGTGGACGAATGCGATTCACAAACGGTCTCATGGGTATCCGACTTGCCCAATCTGCCAATGTCCAACA
CCTAAGACTGAACTACAACGCTGGTCTGTCTGTAGTTTATGTGCAGTTCGAAAACCAGAAGTTTAG

Upstream 100 bases:

>100_bases
GGGTTTTCTCACCCTATCAGGTGATAAAGGGGCCAAGAGCTGAATCAAACCTCTACTTGAATTGAGTAGGTATTTGTCTT
CTCTGTTGTTTTAATTGGTT

Downstream 100 bases:

>100_bases
GATAAGTCCTAATAAAAAAACCATCAGCATTCACTTATGGGCTCGTGGGACATACTGACTGGTCGTGCATCAAAAAAGTG
TGGGTTTGTTAAACCGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSLQPVQQVLSTLKQTHWQHEQEFVQLLDTWTQIVGPVVAAQTQPIQITPRKILLVATTSSAWAQNLAFERSRILHKLNT
QLSYEFTDIRFSTSQWPRRSNNTHRRSVPPSITPASLLPALPVARLEPSLDPNEAFERWTNAIHKRSHGYPTCPICQCPT
PKTELQRWSVCSLCAVRKPEV

Sequences:

>Translated_181_residues
MSLQPVQQVLSTLKQTHWQHEQEFVQLLDTWTQIVGPVVAAQTQPIQITPRKILLVATTSSAWAQNLAFERSRILHKLNT
QLSYEFTDIRFSTSQWPRRSNNTHRRSVPPSITPASLLPALPVARLEPSLDPNEAFERWTNAIHKRSHGYPTCPICQCPT
PKTELQRWSVCSLCAVRKPEV
>Mature_180_residues
SLQPVQQVLSTLKQTHWQHEQEFVQLLDTWTQIVGPVVAAQTQPIQITPRKILLVATTSSAWAQNLAFERSRILHKLNTQ
LSYEFTDIRFSTSQWPRRSNNTHRRSVPPSITPASLLPALPVARLEPSLDPNEAFERWTNAIHKRSHGYPTCPICQCPTP
KTELQRWSVCSLCAVRKPEV

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20684; Mature: 20553

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQPVQQVLSTLKQTHWQHEQEFVQLLDTWTQIVGPVVAAQTQPIQITPRKILLVATTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECC
SAWAQNLAFERSRILHKLNTQLSYEFTDIRFSTSQWPRRSNNTHRRSVPPSITPASLLPA
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHC
LPVARLEPSLDPNEAFERWTNAIHKRSHGYPTCPICQCPTPKTELQRWSVCSLCAVRKPE
CCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
V
C
>Mature Secondary Structure 
SLQPVQQVLSTLKQTHWQHEQEFVQLLDTWTQIVGPVVAAQTQPIQITPRKILLVATTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECC
SAWAQNLAFERSRILHKLNTQLSYEFTDIRFSTSQWPRRSNNTHRRSVPPSITPASLLPA
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHC
LPVARLEPSLDPNEAFERWTNAIHKRSHGYPTCPICQCPTPKTELQRWSVCSLCAVRKPE
CCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA