| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338196
Identifier: 158338196
GI number: 158338196
Start: 5143277
End: 5144281
Strand: Reverse
Name: 158338196
Synonym: AM1_5089
Alternate gene names: NA
Gene position: 5144281-5143277 (Counterclockwise)
Preceding gene: 158338197
Following gene: 158338195
Centisome position: 79.1
GC content: 50.55
Gene sequence:
>1005_bases ATGGAGCAGCGATGGAGCTGGGTGAAGCAGCTATGGGCAAGCTATAAGTCCGTTTTTTTCGCTGGCTTGCTGATGGCGGT TTTGGCCTTTTTAGGGAAAGCCCTATTCGAGCATTGGCAGGCGATTGCAGCCATTCAGATTACTCTGTCGGCTTGGGCTA GCGTTGCGATCGCAACCGGTATCACCCTATTTGCCTTTACCTGGACTGGGTGGGTTTGGGGCTGGATTTTAGAGGATTTA GGACATCCCGTCAGCAATATTTGGGCAACCCAGATTTACCTAACCACTAATATTGCCAAATACTTACCCAGCAATCTCCT CCACCTTTATGGTCGAACCCTTGCTGCCCAAAACGTAGGAATTCCTCTCACCGCTGCCTCCCTTAGTGTCATTCTCGACA CTCTTCTAATGATTTCAGCAGGGTTGATTCTGGGGTTATTAAGCGTACCGCAGGGGGGGCTATGGACGGCAGGCTTGGGA CTACTAGCTGCCTTAGTTATTGTCCATCCTAAAATTTTGCGGTTTCTGATTCGACGGCTGTCTCAACTCGGAGCCGTTAT TTCTAAATCCAAATCGAAAAGAAGACCTAAACCCTTCCTGCTCAAGCACTATCCCTGGCGTCCTTTACTGGGTGAAATTA GCATTATTGTCCTGAGGGGTCTGGGATTTGCTCTCACCGTCCAAGCCCTTACGCCTGTAGAGATTGAAGCGATTCCGCGT TTGATTAGCATTTTCAGTATTGGTTGGCTGCTGGGATTTGTCACTCCTGGGATTCCAGGGGGAGTCGGCGTGTTTGAACT CACCGTTTGTCAGCTGATGATTCGCCCCGGCGTCCTGACCGAGGCCTCCACCCTTTCCTACGGGGTAGCGTTGGGCAGTG TCGCTTTGTATCGATTGATGAACACCCTTGCCGAAGCCTTGGGGGCAGGTCTAGCGTGGTTAGACACAAAGCAATCTCAA ACTGCAACAACCCCTATCCTCCGATCAAAGATTGACAAGCCATAG
Upstream 100 bases:
>100_bases TATCAGTCTAAGTTGTTTAATCCAGACTGGCTGAAAGCCAAAGGACTCAGTCCTGATTAATAAAGACTAGCGGTCTATAC CCAAGTTAGAGCATATTTTT
Downstream 100 bases:
>100_bases CACTACAAGGCTTTGAAGAATTACAGCTCTCATGAAAAGAGCCCGTCAATAGGACCAATTACTAGTCCTAGAAATCGAGC TTAATAATACGAAATATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEQRWSWVKQLWASYKSVFFAGLLMAVLAFLGKALFEHWQAIAAIQITLSAWASVAIATGITLFAFTWTGWVWGWILEDL GHPVSNIWATQIYLTTNIAKYLPSNLLHLYGRTLAAQNVGIPLTAASLSVILDTLLMISAGLILGLLSVPQGGLWTAGLG LLAALVIVHPKILRFLIRRLSQLGAVISKSKSKRRPKPFLLKHYPWRPLLGEISIIVLRGLGFALTVQALTPVEIEAIPR LISIFSIGWLLGFVTPGIPGGVGVFELTVCQLMIRPGVLTEASTLSYGVALGSVALYRLMNTLAEALGAGLAWLDTKQSQ TATTPILRSKIDKP
Sequences:
>Translated_334_residues MEQRWSWVKQLWASYKSVFFAGLLMAVLAFLGKALFEHWQAIAAIQITLSAWASVAIATGITLFAFTWTGWVWGWILEDL GHPVSNIWATQIYLTTNIAKYLPSNLLHLYGRTLAAQNVGIPLTAASLSVILDTLLMISAGLILGLLSVPQGGLWTAGLG LLAALVIVHPKILRFLIRRLSQLGAVISKSKSKRRPKPFLLKHYPWRPLLGEISIIVLRGLGFALTVQALTPVEIEAIPR LISIFSIGWLLGFVTPGIPGGVGVFELTVCQLMIRPGVLTEASTLSYGVALGSVALYRLMNTLAEALGAGLAWLDTKQSQ TATTPILRSKIDKP >Mature_334_residues MEQRWSWVKQLWASYKSVFFAGLLMAVLAFLGKALFEHWQAIAAIQITLSAWASVAIATGITLFAFTWTGWVWGWILEDL GHPVSNIWATQIYLTTNIAKYLPSNLLHLYGRTLAAQNVGIPLTAASLSVILDTLLMISAGLILGLLSVPQGGLWTAGLG LLAALVIVHPKILRFLIRRLSQLGAVISKSKSKRRPKPFLLKHYPWRPLLGEISIIVLRGLGFALTVQALTPVEIEAIPR LISIFSIGWLLGFVTPGIPGGVGVFELTVCQLMIRPGVLTEASTLSYGVALGSVALYRLMNTLAEALGAGLAWLDTKQSQ TATTPILRSKIDKP
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36343; Mature: 36343
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRWSWVKQLWASYKSVFFAGLLMAVLAFLGKALFEHWQAIAAIQITLSAWASVAIATG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITLFAFTWTGWVWGWILEDLGHPVSNIWATQIYLTTNIAKYLPSNLLHLYGRTLAAQNVG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPLTAASLSVILDTLLMISAGLILGLLSVPQGGLWTAGLGLLAALVIVHPKILRFLIRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQLGAVISKSKSKRRPKPFLLKHYPWRPLLGEISIIVLRGLGFALTVQALTPVEIEAIPR HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCHHHHHHHH LISIFSIGWLLGFVTPGIPGGVGVFELTVCQLMIRPGVLTEASTLSYGVALGSVALYRLM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH NTLAEALGAGLAWLDTKQSQTATTPILRSKIDKP HHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MEQRWSWVKQLWASYKSVFFAGLLMAVLAFLGKALFEHWQAIAAIQITLSAWASVAIATG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITLFAFTWTGWVWGWILEDLGHPVSNIWATQIYLTTNIAKYLPSNLLHLYGRTLAAQNVG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPLTAASLSVILDTLLMISAGLILGLLSVPQGGLWTAGLGLLAALVIVHPKILRFLIRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQLGAVISKSKSKRRPKPFLLKHYPWRPLLGEISIIVLRGLGFALTVQALTPVEIEAIPR HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCHHHHHHHH LISIFSIGWLLGFVTPGIPGGVGVFELTVCQLMIRPGVLTEASTLSYGVALGSVALYRLM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH NTLAEALGAGLAWLDTKQSQTATTPILRSKIDKP HHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA