| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338194
Identifier: 158338194
GI number: 158338194
Start: 5140220
End: 5140609
Strand: Reverse
Name: 158338194
Synonym: AM1_5087
Alternate gene names: NA
Gene position: 5140609-5140220 (Counterclockwise)
Preceding gene: 158338195
Following gene: 158338188
Centisome position: 79.04
GC content: 52.31
Gene sequence:
>390_bases ATGACAACAGTATTATTTTGTGCCCTGGCACTAGCCATGTGGTCTCTTCCCCTCAATTACATCCCCACCCTGGCGCGGTT TGCAGAAGGGGGAATGGAATGGGCCACCAGCAACCGGGACACTATGCCAGAGATTCCCCCCTGGGCTCAACGGGCAGAGC GGGCTCAGCGCAACCATTATGAAAATTTACCGATGTTGGTGGTGACCCTGCTCGTCGTTCAGTTGTCGGGAACTGCCAAC CCACTGATTAATCTGACCGCAATCGTTATGGTGGCCTGCAGGGTCTTTCATGCCTTTGCCTACATTATTGGCGTACCAGT TTTGCGGTCGTTGGGATTTGTCGGGTCTATCTTGTCTCTATTTGTGATTCTGTGGCAGCTTCTGGTTTAG
Upstream 100 bases:
>100_bases CATAGGGCAATTTTCAGGACTTTTACCTTGCTGTAGCACACAAATATTCCATTGCTCAGTACCATTAGGGCTATTGGTAT TTTGCTTAGATTAACCGGCT
Downstream 100 bases:
>100_bases GGGCCGCGAACCTAAAAAGGGCTTAAGTCAGCGATCGCTTCTTACGCAGTAACAAAGGCATTGCCGACAGCACCGCTAGG CAGGTACAGGCAATCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTTVLFCALALAMWSLPLNYIPTLARFAEGGMEWATSNRDTMPEIPPWAQRAERAQRNHYENLPMLVVTLLVVQLSGTAN PLINLTAIVMVACRVFHAFAYIIGVPVLRSLGFVGSILSLFVILWQLLV
Sequences:
>Translated_129_residues MTTVLFCALALAMWSLPLNYIPTLARFAEGGMEWATSNRDTMPEIPPWAQRAERAQRNHYENLPMLVVTLLVVQLSGTAN PLINLTAIVMVACRVFHAFAYIIGVPVLRSLGFVGSILSLFVILWQLLV >Mature_128_residues TTVLFCALALAMWSLPLNYIPTLARFAEGGMEWATSNRDTMPEIPPWAQRAERAQRNHYENLPMLVVTLLVVQLSGTANP LINLTAIVMVACRVFHAFAYIIGVPVLRSLGFVGSILSLFVILWQLLV
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14357; Mature: 14226
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLFCALALAMWSLPLNYIPTLARFAEGGMEWATSNRDTMPEIPPWAQRAERAQRNHY CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCC ENLPMLVVTLLVVQLSGTANPLINLTAIVMVACRVFHAFAYIIGVPVLRSLGFVGSILSL CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVILWQLLV HHHHHHHHC >Mature Secondary Structure TTVLFCALALAMWSLPLNYIPTLARFAEGGMEWATSNRDTMPEIPPWAQRAERAQRNHY HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCC ENLPMLVVTLLVVQLSGTANPLINLTAIVMVACRVFHAFAYIIGVPVLRSLGFVGSILSL CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVILWQLLV HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA