Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337903

Identifier: 158337903

GI number: 158337903

Start: 4825896

End: 4826405

Strand: Direct

Name: 158337903

Synonym: AM1_4790

Alternate gene names: NA

Gene position: 4825896-4826405 (Clockwise)

Preceding gene: 158337902

Following gene: 158337904

Centisome position: 74.2

GC content: 45.1

Gene sequence:

>510_bases
ATGCTGTTTACCATTGTCGAGAGTTTCTCTCCTAGAGACGGCGATCGCTGGATCACTTACTGCCGATGGCGGGGATTAGC
CTTTACCTGTTTTGATTCGATAGATGGCATTCTCAGACCCAGCCTTTTTGATGCAACAGAGAAGGACGATTGGAACCATG
TTGTTAATCAGGATTGCAAGACTCACCTAATAACGGATTACGACTACGCTGTTCACAAGCAGAGTGAGATAGGGCAGGGA
GATCTGGTGGGTTTGAGATTTAGCGAGCATGATCAAAGCGATCCACGATTTTTAAGATTTGATTTAATCGATGGCTATTG
CGACATCTCCTTGCTCACCAATTGGGGAAATGATGTGGATAGTATCAACCGTTCCTTGTCCCCTAATGCGCTAGTACTGA
GTTATCAGACCGTTAAGGCTATCCAAAAGGAATTGTTGCAGACGAATGGTACGGATCCGCATGTTGAAGGATGTCAGATC
GTGTCAATTTACCGACTCAACGAGACTTAA

Upstream 100 bases:

>100_bases
ACTGCTTTTTCTGAGTGAGTCTCTAGAAAGTTCACAACAGGTGTTTCGCAATGAGTCCCCCTATTCAGAACAATATTGAC
CGAGCCGTGAGTCTAAGAAC

Downstream 100 bases:

>100_bases
CGAGTCGATGGAATATCCCTTTTGGGTGGGTTTGGACCTCCAGTGGAAACGGACGATGTTGGCCGTTGTATCTATGACGG
TCCCGAGCCACTTCCAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLFTIVESFSPRDGDRWITYCRWRGLAFTCFDSIDGILRPSLFDATEKDDWNHVVNQDCKTHLITDYDYAVHKQSEIGQG
DLVGLRFSEHDQSDPRFLRFDLIDGYCDISLLTNWGNDVDSINRSLSPNALVLSYQTVKAIQKELLQTNGTDPHVEGCQI
VSIYRLNET

Sequences:

>Translated_169_residues
MLFTIVESFSPRDGDRWITYCRWRGLAFTCFDSIDGILRPSLFDATEKDDWNHVVNQDCKTHLITDYDYAVHKQSEIGQG
DLVGLRFSEHDQSDPRFLRFDLIDGYCDISLLTNWGNDVDSINRSLSPNALVLSYQTVKAIQKELLQTNGTDPHVEGCQI
VSIYRLNET
>Mature_169_residues
MLFTIVESFSPRDGDRWITYCRWRGLAFTCFDSIDGILRPSLFDATEKDDWNHVVNQDCKTHLITDYDYAVHKQSEIGQG
DLVGLRFSEHDQSDPRFLRFDLIDGYCDISLLTNWGNDVDSINRSLSPNALVLSYQTVKAIQKELLQTNGTDPHVEGCQI
VSIYRLNET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19412; Mature: 19412

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTIVESFSPRDGDRWITYCRWRGLAFTCFDSIDGILRPSLFDATEKDDWNHVVNQDCK
CEEEEEECCCCCCCCCEEEEEEECCEEEEEHHHHCHHHCCCCCCCCCCCCCHHHHCCCCC
THLITDYDYAVHKQSEIGQGDLVGLRFSEHDQSDPRFLRFDLIDGYCDISLLTNWGNDVD
EEEEECCCHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEEEECCCCCHH
SINRSLSPNALVLSYQTVKAIQKELLQTNGTDPHVEGCQIVSIYRLNET
HHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLFTIVESFSPRDGDRWITYCRWRGLAFTCFDSIDGILRPSLFDATEKDDWNHVVNQDCK
CEEEEEECCCCCCCCCEEEEEEECCEEEEEHHHHCHHHCCCCCCCCCCCCCHHHHCCCCC
THLITDYDYAVHKQSEIGQGDLVGLRFSEHDQSDPRFLRFDLIDGYCDISLLTNWGNDVD
EEEEECCCHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEEEECCCCCHH
SINRSLSPNALVLSYQTVKAIQKELLQTNGTDPHVEGCQIVSIYRLNET
HHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA