Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is yjcR [C]

Identifier: 158337631

GI number: 158337631

Start: 4537636

End: 4538931

Strand: Direct

Name: yjcR [C]

Synonym: AM1_4513

Alternate gene names: 158337631

Gene position: 4537636-4538931 (Clockwise)

Preceding gene: 158337625

Following gene: 158337632

Centisome position: 69.77

GC content: 50.31

Gene sequence:

>1296_bases
ATGACCACCGGAATTGAGAATTTCCCCAATAATGAATCAACTTACCAATTAGACAAAGAGAAACAAGCCCCGACTCCGTC
TAAGCCTTTATCTTTGCCTTCCCGGCAAACCGTCTTTAAGTTCCTACGTCTAGGCACTGGTATTGGTGTTTTAGCAATTT
TAGGTTCCTATTTATGGCGGAGCCAAACCTCAGTGGTTAGCCACCAAGCCTATATCAATGCCCCTATCCTGTCCTTGCAC
TCCCCAATGCAAGGACAGCTAACCCTCAACAATTTAATCCCTGGGGAAACCTTAACCGCCGGCACTCAAATTGGACAAGT
ACAAAATTTGCGTACCCCTGAGATCGAAGTTAATCGTCAGCAACTTCAGTCGCAATTGCGATTAGACCAATCTCAGCTGC
TGCTCCTACAACAAAAAATTGCCAATCGGCGACAACTCCTGGCTGACTTCTCACAAAAGTTAGTGTTACAGCAGAACTAC
CAAGCCACCTATCATACTCAGCAAATCAGACTACAAGAAGCCCAGTTACGGGATGCTCAGCATGCAGCCAAACTAGCTGA
TGTGCAAGCTGAGCGGTATGGTTCCTTAGTCAAAGCAGGGGTCGTATCTCGCGATCGAGCAGACCAGGCTATTACTGCGG
CTCAACGGGCCAATGAGGTAGTGCGAAATCGCCAGGCCGATCTGAACCAAGCCCGGGCAGAGCAGGCGGCCAGTACCAAT
GGCTTACAGCTCAGTGGCTCTAAAACCTTTAGTCTGCCAGATATTCGAGCCCGAGAACTGCGAACCGAGATTGCTGACTT
AGAAGAGCAAGTCCAGGTCTTACGCACCCAAATTGAGCAAGATAATCTCAAAATCGCTCATATTTCCCAACAGCTCACCC
TCAGGCAAAATGCTCCTATTACGGTTCCCACAGATAGCGTAGTGTGGTCAGTAGAACGGCGCGGTGGGGCCTTAGGTCAA
CATGTGGATAGTGGTGACCCACTGATTAAGCTCCTGGATTGTAAGCAGGTCTGGGTCGATGCCTTTATGGCTGAAGAAGA
TGTGCGTAGCCTGCAAATCGGCTCTGCTGTGAATGTCCGGTTACTGACCGATGGCCAGCAAGATCAAATTGAAGGTCGCA
TCCAATCCATTCGCTCAGGAGTCGGTCGAGTCGTCACGGGACAAGACGTCGCTCTGCCACCCCCGGAATTAGTGAAGCGC
GCTGTTGCCGTAAGGATTATGCTGGCCTCCGATGACCTGAAGCCTGAGCGGTTCTGTAGTGTCGGCCGCAGTGTCGAAGT
TGTCGTCTCTCGCTAA

Upstream 100 bases:

>100_bases
TGAATCGATCGTTTTTTGATATTAAGTAATCGCACTGAAGAAAATAGAAGATTGGTAAGCCAAAATAGGGGTAAGAGAGA
TGGCTTAGAGTTCGCGAGTT

Downstream 100 bases:

>100_bases
GGCCATCCATGTTGAAACGAACTGAGATCGATGGGCTGGAACGGATTGTCTGGGGCTTAGTGATTATCCTTGGGGGCTTT
TGGCTATGGAGCCAGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTTGIENFPNNESTYQLDKEKQAPTPSKPLSLPSRQTVFKFLRLGTGIGVLAILGSYLWRSQTSVVSHQAYINAPILSLH
SPMQGQLTLNNLIPGETLTAGTQIGQVQNLRTPEIEVNRQQLQSQLRLDQSQLLLLQQKIANRRQLLADFSQKLVLQQNY
QATYHTQQIRLQEAQLRDAQHAAKLADVQAERYGSLVKAGVVSRDRADQAITAAQRANEVVRNRQADLNQARAEQAASTN
GLQLSGSKTFSLPDIRARELRTEIADLEEQVQVLRTQIEQDNLKIAHISQQLTLRQNAPITVPTDSVVWSVERRGGALGQ
HVDSGDPLIKLLDCKQVWVDAFMAEEDVRSLQIGSAVNVRLLTDGQQDQIEGRIQSIRSGVGRVVTGQDVALPPPELVKR
AVAVRIMLASDDLKPERFCSVGRSVEVVVSR

Sequences:

>Translated_431_residues
MTTGIENFPNNESTYQLDKEKQAPTPSKPLSLPSRQTVFKFLRLGTGIGVLAILGSYLWRSQTSVVSHQAYINAPILSLH
SPMQGQLTLNNLIPGETLTAGTQIGQVQNLRTPEIEVNRQQLQSQLRLDQSQLLLLQQKIANRRQLLADFSQKLVLQQNY
QATYHTQQIRLQEAQLRDAQHAAKLADVQAERYGSLVKAGVVSRDRADQAITAAQRANEVVRNRQADLNQARAEQAASTN
GLQLSGSKTFSLPDIRARELRTEIADLEEQVQVLRTQIEQDNLKIAHISQQLTLRQNAPITVPTDSVVWSVERRGGALGQ
HVDSGDPLIKLLDCKQVWVDAFMAEEDVRSLQIGSAVNVRLLTDGQQDQIEGRIQSIRSGVGRVVTGQDVALPPPELVKR
AVAVRIMLASDDLKPERFCSVGRSVEVVVSR
>Mature_430_residues
TTGIENFPNNESTYQLDKEKQAPTPSKPLSLPSRQTVFKFLRLGTGIGVLAILGSYLWRSQTSVVSHQAYINAPILSLHS
PMQGQLTLNNLIPGETLTAGTQIGQVQNLRTPEIEVNRQQLQSQLRLDQSQLLLLQQKIANRRQLLADFSQKLVLQQNYQ
ATYHTQQIRLQEAQLRDAQHAAKLADVQAERYGSLVKAGVVSRDRADQAITAAQRANEVVRNRQADLNQARAEQAASTNG
LQLSGSKTFSLPDIRARELRTEIADLEEQVQVLRTQIEQDNLKIAHISQQLTLRQNAPITVPTDSVVWSVERRGGALGQH
VDSGDPLIKLLDCKQVWVDAFMAEEDVRSLQIGSAVNVRLLTDGQQDQIEGRIQSIRSGVGRVVTGQDVALPPPELVKRA
VAVRIMLASDDLKPERFCSVGRSVEVVVSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47782; Mature: 47651

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEEEEEC
>Mature Secondary Structure 
TTGIENFPNNESTYQLDKEKQAPTPSKPLSLPSRQTVFKFLRLGTGIGVLAILGSYLWR
CCCCCCCCCCCCCEEECHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
SQTSVVSHQAYINAPILSLHSPMQGQLTLNNLIPGETLTAGTQIGQVQNLRTPEIEVNRQ
CHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCHH
QLQSQLRLDQSQLLLLQQKIANRRQLLADFSQKLVLQQNYQATYHTQQIRLQEAQLRDAQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HAAKLADVQAERYGSLVKAGVVSRDRADQAITAAQRANEVVRNRQADLNQARAEQAASTN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLQLSGSKTFSLPDIRARELRTEIADLEEQVQVLRTQIEQDNLKIAHISQQLTLRQNAPI
CEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCE
TVPTDSVVWSVERRGGALGQHVDSGDPLIKLLDCKQVWVDAFMAEEDVRSLQIGSAVNVR
EECCCHHEEEEHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEEE
LLTDGQQDQIEGRIQSIRSGVGRVVTGQDVALPPPELVKRAVAVRIMLASDDLKPERFCS
EEECCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHH
VGRSVEVVVSR
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA