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The map label for this gene is yciH [C]

Identifier: 158337625

GI number: 158337625

Start: 4533967

End: 4534308

Strand: Direct

Name: yciH [C]

Synonym: AM1_4506

Alternate gene names: 158337625

Gene position: 4533967-4534308 (Clockwise)

Preceding gene: 158337623

Following gene: 158337631

Centisome position: 69.71

GC content: 48.25

Gene sequence:

>342_bases
ATGGGTAAGAAACAGCGTCCTCAATCCGATCGCCGAGTGTATAGTGAATTTGGTAATTCTCCAGCACCCGATCCAACCTC
CCGTCCCGATCCGCCTCCTGCTCAACAGACTTTGAAGATTCAAGTCTCCCGTAAGGGGCGTAAAGGCAAAACCGTAACCA
TTATTAGTGGCTTTCAAGCCCAACCGACCACCCTAGCCGATTTAACAAAAAAGCTGAAAGCTCAATGTGGTGCTGGTGGC
ACCCTCAAAGACAAAGAAATTGAGGTCCAAGGCGATCATCGCCAAAAACTCGCAGACTACCTCAAGAAACAAGGATATTC
CGTTAAATTCGTGGGTGGCTAA

Upstream 100 bases:

>100_bases
AATAATGGTATCATCGGACTCCAATTTTATCTCAATTATGGAAAGGGGTTAGGGCAGATTCTGGGGGGTAGTGACGGTTC
AGTAGGGAAAGACAGGTTCT

Downstream 100 bases:

>100_bases
GTCTAGGTTACAGACGTAGGTTCCCGGAACAAGGGAATCAGAAACATTGAGGTATCCTCTTCTGCCCTTAAATGTCGGCT
TGCAAACCAAAATAGGTTAA

Product: translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGKKQRPQSDRRVYSEFGNSPAPDPTSRPDPPPAQQTLKIQVSRKGRKGKTVTIISGFQAQPTTLADLTKKLKAQCGAGG
TLKDKEIEVQGDHRQKLADYLKKQGYSVKFVGG

Sequences:

>Translated_113_residues
MGKKQRPQSDRRVYSEFGNSPAPDPTSRPDPPPAQQTLKIQVSRKGRKGKTVTIISGFQAQPTTLADLTKKLKAQCGAGG
TLKDKEIEVQGDHRQKLADYLKKQGYSVKFVGG
>Mature_112_residues
GKKQRPQSDRRVYSEFGNSPAPDPTSRPDPPPAQQTLKIQVSRKGRKGKTVTIISGFQAQPTTLADLTKKLKAQCGAGGT
LKDKEIEVQGDHRQKLADYLKKQGYSVKFVGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=106, Percent_Identity=39.622641509434, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12367; Mature: 12236

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKQRPQSDRRVYSEFGNSPAPDPTSRPDPPPAQQTLKIQVSRKGRKGKTVTIISGFQA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCC
QPTTLADLTKKLKAQCGAGGTLKDKEIEVQGDHRQKLADYLKKQGYSVKFVGG
CCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
GKKQRPQSDRRVYSEFGNSPAPDPTSRPDPPPAQQTLKIQVSRKGRKGKTVTIISGFQA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCC
QPTTLADLTKKLKAQCGAGGTLKDKEIEVQGDHRQKLADYLKKQGYSVKFVGG
CCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]