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The map label for this gene is nrfI [H]

Identifier: 158337524

GI number: 158337524

Start: 4429949

End: 4431649

Strand: Direct

Name: nrfI [H]

Synonym: AM1_4403

Alternate gene names: 158337524

Gene position: 4429949-4431649 (Clockwise)

Preceding gene: 158337523

Following gene: 158337525

Centisome position: 68.11

GC content: 50.56

Gene sequence:

>1701_bases
ATGAATCAACTGCAATTTTTATGGGGACTCTGTCTGGCGTTGGCCTTGGCGGTCACCCCTATCAGTCAATGGCAACCCCC
AACCCAAACAGCGATTGATACCCTGGCTGTTCAGCTGGATGGTCGCAAAAAGCCCTTAGATACAGTGGCCCGGGAAACCG
TCACCACGATTCATGGGTCATCGCGATATCAACTGGCTAGTGGTGAGGTTTTAGATGCGCCACAAATCTATTGGTCTTTG
TGGCTAAACAGCCGGAATTGGAATGACGAGCCCTTTGTGCTGGTCAATTATCGCCCCCTCAAGGCCCAATTGGGACTGCC
CTTGGAGCAAAAGCACTTTAGCTTTTCTACCCTGATCAATTCTAATTTGGGTCTAATCTTGCAACAAGCCCATACCAAAC
AGCTGCAAGAGCAACCCCTGACACGAGATGAACGAGAAGCTCTGACGCTTGAAGATCGCCTTAATTTGATGTTGGATACG
GTTGGCAGCCAAAGCCTGCCTCTGGTGCCCCATCCCATGGATATCAAAGGAACTTGGGTCGGGATTACGGATACTGAACA
GCTTTATCCGCCTGAGATGGCAGCCAAGATTCAAACCCAGTTTGAGCAGCTCAACCAGCAGTATCAAGCTCAGAGAGATG
ATTTAGACTCTTTGGCGGAGCCTGCGGCTCTATTGCAGCAGTCCCTAGCAGACTTAAGTCCTGAGATTTATCCAGCAATG
GCCACGTTGCAACGGGAAGCCTTTTTCAATCACTTCCATCCTTTTGGTAAAGCATGGAAACTGTATGGGATAGCATTCCT
GGTCCTCCTCACTAGCCAACCCATTTCTAGCTTTAACTTGTATTGGACTGGCATGGGAACCTTCCTCGGAGGCATCTTGA
TCCAAGCCTTTGGCTTTGGCCTGCGCATGCAAATTGCAGGCCGTCCTCCCGTTACCAATATGTATGAATCCGTGGTTTGG
GTTGGCTTTGGGATTGCCGCCTTAGCCTTTTGCTTCGAGCTTCAGACCCGAGCCCGTTCCTATCTGTATGCGGCGGCTCC
CCTTGCCGTCGTGTGCCTGCTGCTGGCCGATAGTTTACCTGCAGTTTTGGACCCCAGTATTGAGCCCTTAGTGCCCGTAT
TGCGAGATAACTTTTGGCTCAGTATCCACGTCCCCACGATCACCCTTAGCTATGCCAGCTTTGCTTTGGCCATGGGATTA
GGGCATTTGGCATTGGTGCAATATTGGCGACACCCCCAGGGAGGGTCAACCGCCAGCGCCCTGTCCCGGCTTAATACTCG
CGTCATTCAAGTGGGAATATTGCTGCTAACGACAGGCATTATTTTGGGCGGCATCTGGGCGCATTTTTCCTGGGGGCGAT
TTTGGGGTTGGGATCCAAAAGAGACCTGGGCTTTAATTGCCTTGCTTTGCTATTTAGCGCCTGTTCATGGTCGTTTAGCG
GGTTGGTTAGGACAATTTGGTATGAATGTGGCCAGTGTCTTAGGGTTTAATGCCGTACTGATGGCTTGGTATGGCGTTAA
TTTTGTGTTGGGAACAGGATTACATAGTTATGGATTCGGTACGGGCGGTTCTGCAGTGCTGATCACCGGTTTAGTCGGTA
TGGATAGCTTATTTGTGTTGGCAACCATTCTCCGCTATCGTTCTCAGCAGCATCGTAGTGCTTCTCCCTCGGTGCCTGAA
GTGCAAACTGCTGATGCTTAA

Upstream 100 bases:

>100_bases
GCCCGACCCTATTCAAAAAACGGTCAGCGGTGTTGGAGCAACCCACTGAGCCGATCACGGCTGAACCCACCCCTCTGCCC
CTTGCACCTCAGGATGGATA

Downstream 100 bases:

>100_bases
TGTCAGGATTGTGTCGTCCCATTCATACACACCAATTGGAAAACTAAGCGATGGCCGTTCTCACACCGGAAGAGGTGCAA
ACGAAAGTTCAACAGGGCAT

Product: cytochrome c-type biogenesis protein, CcsA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MNQLQFLWGLCLALALAVTPISQWQPPTQTAIDTLAVQLDGRKKPLDTVARETVTTIHGSSRYQLASGEVLDAPQIYWSL
WLNSRNWNDEPFVLVNYRPLKAQLGLPLEQKHFSFSTLINSNLGLILQQAHTKQLQEQPLTRDEREALTLEDRLNLMLDT
VGSQSLPLVPHPMDIKGTWVGITDTEQLYPPEMAAKIQTQFEQLNQQYQAQRDDLDSLAEPAALLQQSLADLSPEIYPAM
ATLQREAFFNHFHPFGKAWKLYGIAFLVLLTSQPISSFNLYWTGMGTFLGGILIQAFGFGLRMQIAGRPPVTNMYESVVW
VGFGIAALAFCFELQTRARSYLYAAAPLAVVCLLLADSLPAVLDPSIEPLVPVLRDNFWLSIHVPTITLSYASFALAMGL
GHLALVQYWRHPQGGSTASALSRLNTRVIQVGILLLTTGIILGGIWAHFSWGRFWGWDPKETWALIALLCYLAPVHGRLA
GWLGQFGMNVASVLGFNAVLMAWYGVNFVLGTGLHSYGFGTGGSAVLITGLVGMDSLFVLATILRYRSQQHRSASPSVPE
VQTADA

Sequences:

>Translated_566_residues
MNQLQFLWGLCLALALAVTPISQWQPPTQTAIDTLAVQLDGRKKPLDTVARETVTTIHGSSRYQLASGEVLDAPQIYWSL
WLNSRNWNDEPFVLVNYRPLKAQLGLPLEQKHFSFSTLINSNLGLILQQAHTKQLQEQPLTRDEREALTLEDRLNLMLDT
VGSQSLPLVPHPMDIKGTWVGITDTEQLYPPEMAAKIQTQFEQLNQQYQAQRDDLDSLAEPAALLQQSLADLSPEIYPAM
ATLQREAFFNHFHPFGKAWKLYGIAFLVLLTSQPISSFNLYWTGMGTFLGGILIQAFGFGLRMQIAGRPPVTNMYESVVW
VGFGIAALAFCFELQTRARSYLYAAAPLAVVCLLLADSLPAVLDPSIEPLVPVLRDNFWLSIHVPTITLSYASFALAMGL
GHLALVQYWRHPQGGSTASALSRLNTRVIQVGILLLTTGIILGGIWAHFSWGRFWGWDPKETWALIALLCYLAPVHGRLA
GWLGQFGMNVASVLGFNAVLMAWYGVNFVLGTGLHSYGFGTGGSAVLITGLVGMDSLFVLATILRYRSQQHRSASPSVPE
VQTADA
>Mature_566_residues
MNQLQFLWGLCLALALAVTPISQWQPPTQTAIDTLAVQLDGRKKPLDTVARETVTTIHGSSRYQLASGEVLDAPQIYWSL
WLNSRNWNDEPFVLVNYRPLKAQLGLPLEQKHFSFSTLINSNLGLILQQAHTKQLQEQPLTRDEREALTLEDRLNLMLDT
VGSQSLPLVPHPMDIKGTWVGITDTEQLYPPEMAAKIQTQFEQLNQQYQAQRDDLDSLAEPAALLQQSLADLSPEIYPAM
ATLQREAFFNHFHPFGKAWKLYGIAFLVLLTSQPISSFNLYWTGMGTFLGGILIQAFGFGLRMQIAGRPPVTNMYESVVW
VGFGIAALAFCFELQTRARSYLYAAAPLAVVCLLLADSLPAVLDPSIEPLVPVLRDNFWLSIHVPTITLSYASFALAMGL
GHLALVQYWRHPQGGSTASALSRLNTRVIQVGILLLTTGIILGGIWAHFSWGRFWGWDPKETWALIALLCYLAPVHGRLA
GWLGQFGMNVASVLGFNAVLMAWYGVNFVLGTGLHSYGFGTGGSAVLITGLVGMDSLFVLATILRYRSQQHRSASPSVPE
VQTADA

Specific function: May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR007816 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm; PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 62565; Mature: 62565

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLQFLWGLCLALALAVTPISQWQPPTQTAIDTLAVQLDGRKKPLDTVARETVTTIHGS
CCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
SRYQLASGEVLDAPQIYWSLWLNSRNWNDEPFVLVNYRPLKAQLGLPLEQKHFSFSTLIN
CCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCHHHCCCCCHHHCCHHHHHHC
SNLGLILQQAHTKQLQEQPLTRDEREALTLEDRLNLMLDTVGSQSLPLVPHPMDIKGTWV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
GITDTEQLYPPEMAAKIQTQFEQLNQQYQAQRDDLDSLAEPAALLQQSLADLSPEIYPAM
ECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ATLQREAFFNHFHPFGKAWKLYGIAFLVLLTSQPISSFNLYWTGMGTFLGGILIQAFGFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCC
LRMQIAGRPPVTNMYESVVWVGFGIAALAFCFELQTRARSYLYAAAPLAVVCLLLADSLP
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVLDPSIEPLVPVLRDNFWLSIHVPTITLSYASFALAMGLGHLALVQYWRHPQGGSTASA
HHHCCCHHHHHHHHCCCEEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSRLNTRVIQVGILLLTTGIILGGIWAHFSWGRFWGWDPKETWALIALLCYLAPVHGRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GWLGQFGMNVASVLGFNAVLMAWYGVNFVLGTGLHSYGFGTGGSAVLITGLVGMDSLFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEHHHHHHHHHHH
ATILRYRSQQHRSASPSVPEVQTADA
HHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQLQFLWGLCLALALAVTPISQWQPPTQTAIDTLAVQLDGRKKPLDTVARETVTTIHGS
CCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
SRYQLASGEVLDAPQIYWSLWLNSRNWNDEPFVLVNYRPLKAQLGLPLEQKHFSFSTLIN
CCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCHHHCCCCCHHHCCHHHHHHC
SNLGLILQQAHTKQLQEQPLTRDEREALTLEDRLNLMLDTVGSQSLPLVPHPMDIKGTWV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
GITDTEQLYPPEMAAKIQTQFEQLNQQYQAQRDDLDSLAEPAALLQQSLADLSPEIYPAM
ECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ATLQREAFFNHFHPFGKAWKLYGIAFLVLLTSQPISSFNLYWTGMGTFLGGILIQAFGFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCC
LRMQIAGRPPVTNMYESVVWVGFGIAALAFCFELQTRARSYLYAAAPLAVVCLLLADSLP
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVLDPSIEPLVPVLRDNFWLSIHVPTITLSYASFALAMGLGHLALVQYWRHPQGGSTASA
HHHCCCHHHHHHHHCCCEEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSRLNTRVIQVGILLLTTGIILGGIWAHFSWGRFWGWDPKETWALIALLCYLAPVHGRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GWLGQFGMNVASVLGFNAVLMAWYGVNFVLGTGLHSYGFGTGGSAVLITGLVGMDSLFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEHHHHHHHHHHH
ATILRYRSQQHRSASPSVPEVQTADA
HHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]