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The map label for this gene is yjcF [C]

Identifier: 158337525

GI number: 158337525

Start: 4431700

End: 4432626

Strand: Direct

Name: yjcF [C]

Synonym: AM1_4404

Alternate gene names: 158337525

Gene position: 4431700-4432626 (Clockwise)

Preceding gene: 158337524

Following gene: 158337526

Centisome position: 68.14

GC content: 46.93

Gene sequence:

>927_bases
ATGGCCGTTCTCACACCGGAAGAGGTGCAAACGAAAGTTCAACAGGGCATTTCTTTACAAGGAGCAGAACTCAGCAATAT
CAATTTGCAGGGATTCTCCCTGGATGATGGTCATTTCCCACAAGCCTATTTACGGGTGGCGAATTTATCCCAAGCCTCCT
GTAATCGAGCCGATTTTACGGAAGCGATCTTGATCTTTGCAACCCTCACGGGAATTAGCTTGCAGGATGCATTACTAACG
GAAGCTCAATTTACCTCTGCCCGCCTTGACTCGGCTAATTTGATGGGGATTCATGGCGTGAAGCTCAAACTGCATGGTGC
CCATTTGGATCAAGCGAATGCGGCCACAGCCATTTTGGAGTCGGTGGATTTAGCAGAAGCCACTGGCCAGTATGCCTCCT
TCAGAGATGCCATTTTAATCAGAGCTGATCTGTCTCAGGGCGATTTCAAGGGGGCTAACTTTAGCCGAGCGAAGCTCAAT
GATGCCAATTTGAGTCAGGGACAATTCTCAGAGGCCATTTTTGCCCATGCCCGCTTGGAACGGTCTCGCTTTGTACAGTC
CAATTTACAAAAAGCAGATTTTACTGGGGCTGATTTAATCGGCAGTAACTTAGAGCAGGTCAATTTACAGGAAGCACAGC
TACAGCAGGCCAGTTTTGATCATGTGCTCTTAGGGCAAACTTGTATGCGCGACGCTCGGTTGAACCATGCCTCTTTCTAT
AGTGCTCATTTAGAGCAGGCTGACTTAACGGGTGCTCAAGTAGAGCAGACAGATTTTCGGGATGCCAATTTGGAAAACAC
TCAACTTCACAACGTTGATTTTTTTAACACCATTGTGTCTGGCGCAATCTTTACCGATGCTAAAGGATTATCCAGTGAGC
AGAAAGTACTACTGCGAAAACAGGGCGCTCTAAATGTCCCTAAATAA

Upstream 100 bases:

>100_bases
ATCGTAGTGCTTCTCCCTCGGTGCCTGAAGTGCAAACTGCTGATGCTTAATGTCAGGATTGTGTCGTCCCATTCATACAC
ACCAATTGGAAAACTAAGCG

Downstream 100 bases:

>100_bases
TGTATCTTTTTATACTTTTTTATTGGGCGTATTCTTTGCTAGAGAAACCGTAATTACTGATGTAATTTTTGCATTGAAGT
TATGCAATCGACGACTTTTA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAVLTPEEVQTKVQQGISLQGAELSNINLQGFSLDDGHFPQAYLRVANLSQASCNRADFTEAILIFATLTGISLQDALLT
EAQFTSARLDSANLMGIHGVKLKLHGAHLDQANAATAILESVDLAEATGQYASFRDAILIRADLSQGDFKGANFSRAKLN
DANLSQGQFSEAIFAHARLERSRFVQSNLQKADFTGADLIGSNLEQVNLQEAQLQQASFDHVLLGQTCMRDARLNHASFY
SAHLEQADLTGAQVEQTDFRDANLENTQLHNVDFFNTIVSGAIFTDAKGLSSEQKVLLRKQGALNVPK

Sequences:

>Translated_308_residues
MAVLTPEEVQTKVQQGISLQGAELSNINLQGFSLDDGHFPQAYLRVANLSQASCNRADFTEAILIFATLTGISLQDALLT
EAQFTSARLDSANLMGIHGVKLKLHGAHLDQANAATAILESVDLAEATGQYASFRDAILIRADLSQGDFKGANFSRAKLN
DANLSQGQFSEAIFAHARLERSRFVQSNLQKADFTGADLIGSNLEQVNLQEAQLQQASFDHVLLGQTCMRDARLNHASFY
SAHLEQADLTGAQVEQTDFRDANLENTQLHNVDFFNTIVSGAIFTDAKGLSSEQKVLLRKQGALNVPK
>Mature_307_residues
AVLTPEEVQTKVQQGISLQGAELSNINLQGFSLDDGHFPQAYLRVANLSQASCNRADFTEAILIFATLTGISLQDALLTE
AQFTSARLDSANLMGIHGVKLKLHGAHLDQANAATAILESVDLAEATGQYASFRDAILIRADLSQGDFKGANFSRAKLND
ANLSQGQFSEAIFAHARLERSRFVQSNLQKADFTGADLIGSNLEQVNLQEAQLQQASFDHVLLGQTCMRDARLNHASFYS
AHLEQADLTGAQVEQTDFRDANLENTQLHNVDFFNTIVSGAIFTDAKGLSSEQKVLLRKQGALNVPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 33479; Mature: 33348

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLTPEEVQTKVQQGISLQGAELSNINLQGFSLDDGHFPQAYLRVANLSQASCNRADFT
CCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHCCCHHCCCCHHHH
EAILIFATLTGISLQDALLTEAQFTSARLDSANLMGIHGVKLKLHGAHLDQANAATAILE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHH
SVDLAEATGQYASFRDAILIRADLSQGDFKGANFSRAKLNDANLSQGQFSEAIFAHARLE
HHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RSRFVQSNLQKADFTGADLIGSNLEQVNLQEAQLQQASFDHVLLGQTCMRDARLNHASFY
HHHHHHHHCHHCCCCCHHHHCCCHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHH
SAHLEQADLTGAQVEQTDFRDANLENTQLHNVDFFNTIVSGAIFTDAKGLSSEQKVLLRK
HHHHHHHCCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHCHHEECCCCCCHHHHHHHHH
QGALNVPK
CCCCCCCC
>Mature Secondary Structure 
AVLTPEEVQTKVQQGISLQGAELSNINLQGFSLDDGHFPQAYLRVANLSQASCNRADFT
CCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHCCCHHCCCCHHHH
EAILIFATLTGISLQDALLTEAQFTSARLDSANLMGIHGVKLKLHGAHLDQANAATAILE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHH
SVDLAEATGQYASFRDAILIRADLSQGDFKGANFSRAKLNDANLSQGQFSEAIFAHARLE
HHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RSRFVQSNLQKADFTGADLIGSNLEQVNLQEAQLQQASFDHVLLGQTCMRDARLNHASFY
HHHHHHHHCHHCCCCCHHHHCCCHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHH
SAHLEQADLTGAQVEQTDFRDANLENTQLHNVDFFNTIVSGAIFTDAKGLSSEQKVLLRK
HHHHHHHCCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHCHHEECCCCCCHHHHHHHHH
QGALNVPK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]