| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337523
Identifier: 158337523
GI number: 158337523
Start: 4428204
End: 4429949
Strand: Direct
Name: 158337523
Synonym: AM1_4402
Alternate gene names: NA
Gene position: 4428204-4429949 (Clockwise)
Preceding gene: 158337522
Following gene: 158337524
Centisome position: 68.09
GC content: 53.15
Gene sequence:
>1746_bases ATGCTCACCAAACTTGTCCGCTTCTTGGGCTCAATTAAGCTGGCCGTCCCAGTACTGGGTGCGATCGCAAGTATCTTAAT TTGGGCGACGTTCTATGAGAGCAAGGTAGGGTCCCTTGTCGTCCAGCAGCAAATCTATAAGAGTCCCTGGTTTGGGGCCT TGATGTTTCTGCTAGCGGTCAATTTGGGGGTTTCCACCCTCTCCCGTTATCCCTGGCGAGGGGCGCGGAAAGTGGGCTTT GCCCTCACCCATTTGGGATTAATCGTGCTGATTGCAGGGTCTGCAGCGGTGATTCACCTCGGTGTGGAAGGACTTTTACT AGTCCGTACCGATCAACCAGCGAACCATTTGGTTCGGGTTGAGGGGGAATTATTAGAAGTGATGGATGACCAAGGCCAAG TACAACAGGCAGCGGTGATGGTAACGCCTGAGCGAATTATTTCTCCCACTCAATTCGCTGGGTTAAGGTTGTTGGACTAT ATCGAGAATTCCGTCGAAACGGTTGAATATCGTGACGGTGATGCCCAGGATGATCCAGCAATACGGTTGGTATTGAGTAG CGATCGCATGGGTCAAACCTTTGATCAGTGGTTATCGCCCGCTGCTGAAACGGTAGATTTGGGGCCAGCCCAACTGGAAC TGTGGCAAGCTGCCAATCAGACCGATCTCCAACAGCTCTTGACCGATCCAACCCAACAGCAAGCCCGCCAATCTGGAACC CTGATGTTCAAGATGGGAGACGTAGATACCCCGTTGGCCATTGATGACTTACGCCGTCAGGATGCCGTCATTAATGATAT CCAGGTTCACTTACTGAACGTGTGGCCTGATTTTCGCTTGGATGACCAGAATCAGCCGATCACAGCGTCTCAGGATTGGC GAAATCCAGCCTTAGAAGTAGAAGTGACCCAGGCCGATCTGCAAGAACGCTGGTTTGTCTTTGCTCAAGCTGGGCCGATC TTGGCGGGGGATGAGTCTTTACTGGATTTGGATTGGGAGTATCAAATCCCACCGCCCCCGACTAGCGACTACTTCCGAGT CGTGGTTGCCAATCAAAAGCTCTATTATGCAGCCCGCTCCTCTAAGTCTTTTACATCAGGGCCTTTGGTGATGGATCAAA TGATTCAGCCGGGCTGGGCAGATTTTAAAATCACCCTGGCAGACTGGCTTCCCCATGGGAAGCGGATCCAAGAGCGCCTT CCCGCTCCATCTGGTGTTGAAGGAGTTCCGGCGTTGCAGGTGGCCTCAGCGGATGGGCAGCAATGGCTGACCTGGGGGGA CTCAGCACTGATTGCCGATGGTGCGCACCCTAAAATGGCGGCCTTTGGCCCTCGCATGCTGGCCTTACCCTTTCGGGTGG GTCTGGATGATTTTGTCGTTGAACGGAATGAAGGTAGCGACTCGGTGGCCATGTGGACGAGCCAAATTCGCATCGAAGAT CTTCAGGGAGAATCTGCTCAAAAACGGTCGGTCTGGATGAATCATCCCACCTGGTACCAGGGATGGAAAATTGCCCAAGC CTCTTGGAATCCTGGCGATTTGAACCAGTCCACCCTGCAAGTTAAACGGGAACCCCTATGGGTGACCGCTTTGACCTGGA GTGGCGCTTTACTGACCGTATTAGGGGTTGGCGTTATGTTTTATGGCCCGACCCTATTCAAAAAACGGTCAGCGGTGTTG GAGCAACCCACTGAGCCGATCACGGCTGAACCCACCCCTCTGCCCCTTGCACCTCAGGATGGATAA
Upstream 100 bases:
>100_bases AACCTATGCGTTTACCCTGCCTAATTTGATACATCCACTACATTTTCTACAGACCGATTCAGACTAAATGGGGACAGGTT CTCGATGATTTGAGGTCTGA
Downstream 100 bases:
>100_bases TGAATCAACTGCAATTTTTATGGGGACTCTGTCTGGCGTTGGCCTTGGCGGTCACCCCTATCAGTCAATGGCAACCCCCA ACCCAAACAGCGATTGATAC
Product: cytochrome c biogenesis protein, CcsB-like protein
Products: NA
Alternate protein names: Cytochrome C Biogenesis Protein CcsB-Like Protein
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MLTKLVRFLGSIKLAVPVLGAIASILIWATFYESKVGSLVVQQQIYKSPWFGALMFLLAVNLGVSTLSRYPWRGARKVGF ALTHLGLIVLIAGSAAVIHLGVEGLLLVRTDQPANHLVRVEGELLEVMDDQGQVQQAAVMVTPERIISPTQFAGLRLLDY IENSVETVEYRDGDAQDDPAIRLVLSSDRMGQTFDQWLSPAAETVDLGPAQLELWQAANQTDLQQLLTDPTQQQARQSGT LMFKMGDVDTPLAIDDLRRQDAVINDIQVHLLNVWPDFRLDDQNQPITASQDWRNPALEVEVTQADLQERWFVFAQAGPI LAGDESLLDLDWEYQIPPPPTSDYFRVVVANQKLYYAARSSKSFTSGPLVMDQMIQPGWADFKITLADWLPHGKRIQERL PAPSGVEGVPALQVASADGQQWLTWGDSALIADGAHPKMAAFGPRMLALPFRVGLDDFVVERNEGSDSVAMWTSQIRIED LQGESAQKRSVWMNHPTWYQGWKIAQASWNPGDLNQSTLQVKREPLWVTALTWSGALLTVLGVGVMFYGPTLFKKRSAVL EQPTEPITAEPTPLPLAPQDG
Sequences:
>Translated_581_residues MLTKLVRFLGSIKLAVPVLGAIASILIWATFYESKVGSLVVQQQIYKSPWFGALMFLLAVNLGVSTLSRYPWRGARKVGF ALTHLGLIVLIAGSAAVIHLGVEGLLLVRTDQPANHLVRVEGELLEVMDDQGQVQQAAVMVTPERIISPTQFAGLRLLDY IENSVETVEYRDGDAQDDPAIRLVLSSDRMGQTFDQWLSPAAETVDLGPAQLELWQAANQTDLQQLLTDPTQQQARQSGT LMFKMGDVDTPLAIDDLRRQDAVINDIQVHLLNVWPDFRLDDQNQPITASQDWRNPALEVEVTQADLQERWFVFAQAGPI LAGDESLLDLDWEYQIPPPPTSDYFRVVVANQKLYYAARSSKSFTSGPLVMDQMIQPGWADFKITLADWLPHGKRIQERL PAPSGVEGVPALQVASADGQQWLTWGDSALIADGAHPKMAAFGPRMLALPFRVGLDDFVVERNEGSDSVAMWTSQIRIED LQGESAQKRSVWMNHPTWYQGWKIAQASWNPGDLNQSTLQVKREPLWVTALTWSGALLTVLGVGVMFYGPTLFKKRSAVL EQPTEPITAEPTPLPLAPQDG >Mature_581_residues MLTKLVRFLGSIKLAVPVLGAIASILIWATFYESKVGSLVVQQQIYKSPWFGALMFLLAVNLGVSTLSRYPWRGARKVGF ALTHLGLIVLIAGSAAVIHLGVEGLLLVRTDQPANHLVRVEGELLEVMDDQGQVQQAAVMVTPERIISPTQFAGLRLLDY IENSVETVEYRDGDAQDDPAIRLVLSSDRMGQTFDQWLSPAAETVDLGPAQLELWQAANQTDLQQLLTDPTQQQARQSGT LMFKMGDVDTPLAIDDLRRQDAVINDIQVHLLNVWPDFRLDDQNQPITASQDWRNPALEVEVTQADLQERWFVFAQAGPI LAGDESLLDLDWEYQIPPPPTSDYFRVVVANQKLYYAARSSKSFTSGPLVMDQMIQPGWADFKITLADWLPHGKRIQERL PAPSGVEGVPALQVASADGQQWLTWGDSALIADGAHPKMAAFGPRMLALPFRVGLDDFVVERNEGSDSVAMWTSQIRIED LQGESAQKRSVWMNHPTWYQGWKIAQASWNPGDLNQSTLQVKREPLWVTALTWSGALLTVLGVGVMFYGPTLFKKRSAVL EQPTEPITAEPTPLPLAPQDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64404; Mature: 64404
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKLVRFLGSIKLAVPVLGAIASILIWATFYESKVGSLVVQQQIYKSPWFGALMFLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NLGVSTLSRYPWRGARKVGFALTHLGLIVLIAGSAAVIHLGVEGLLLVRTDQPANHLVRV HCCHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEECCCCCCCEEEE EGELLEVMDDQGQVQQAAVMVTPERIISPTQFAGLRLLDYIENSVETVEYRDGDAQDDPA CHHHHHHHCCCCCHHHEEEEECHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCE IRLVLSSDRMGQTFDQWLSPAAETVDLGPAQLELWQAANQTDLQQLLTDPTQQQARQSGT EEEEEECCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCC LMFKMGDVDTPLAIDDLRRQDAVINDIQVHLLNVWPDFRLDDQNQPITASQDWRNPALEV EEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEE EVTQADLQERWFVFAQAGPILAGDESLLDLDWEYQIPPPPTSDYFRVVVANQKLYYAARS EEEHHCCCCCEEEEEECCCEEECCCCEEECCEEEECCCCCCCCCEEEEEECCEEEEEECC SKSFTSGPLVMDQMIQPGWADFKITLADWLPHGKRIQERLPAPSGVEGVPALQVASADGQ CCCCCCCCHHHHHHCCCCCCCEEEEHHHHCCCCHHHHHHCCCCCCCCCCCEEEEECCCCC QWLTWGDSALIADGAHPKMAAFGPRMLALPFRVGLDDFVVERNEGSDSVAMWTSQIRIED EEEEECCCEEEECCCCCCHHHCCCEEEEEEECCCCCHHEEECCCCCCCEEEEEEEEEEEE LQGESAQKRSVWMNHPTWYQGWKIAQASWNPGDLNQSTLQVKREPLWVTALTWSGALLTV CCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCHHHHEECCCEEEEEEECCCHHHHH LGVGVMFYGPTLFKKRSAVLEQPTEPITAEPTPLPLAPQDG HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTKLVRFLGSIKLAVPVLGAIASILIWATFYESKVGSLVVQQQIYKSPWFGALMFLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NLGVSTLSRYPWRGARKVGFALTHLGLIVLIAGSAAVIHLGVEGLLLVRTDQPANHLVRV HCCHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEECCCCCCCEEEE EGELLEVMDDQGQVQQAAVMVTPERIISPTQFAGLRLLDYIENSVETVEYRDGDAQDDPA CHHHHHHHCCCCCHHHEEEEECHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCE IRLVLSSDRMGQTFDQWLSPAAETVDLGPAQLELWQAANQTDLQQLLTDPTQQQARQSGT EEEEEECCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCC LMFKMGDVDTPLAIDDLRRQDAVINDIQVHLLNVWPDFRLDDQNQPITASQDWRNPALEV EEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEE EVTQADLQERWFVFAQAGPILAGDESLLDLDWEYQIPPPPTSDYFRVVVANQKLYYAARS EEEHHCCCCCEEEEEECCCEEECCCCEEECCEEEECCCCCCCCCEEEEEECCEEEEEECC SKSFTSGPLVMDQMIQPGWADFKITLADWLPHGKRIQERLPAPSGVEGVPALQVASADGQ CCCCCCCCHHHHHHCCCCCCCEEEEHHHHCCCCHHHHHHCCCCCCCCCCCEEEEECCCCC QWLTWGDSALIADGAHPKMAAFGPRMLALPFRVGLDDFVVERNEGSDSVAMWTSQIRIED EEEEECCCEEEECCCCCCHHHCCCEEEEEEECCCCCHHEEECCCCCCCEEEEEEEEEEEE LQGESAQKRSVWMNHPTWYQGWKIAQASWNPGDLNQSTLQVKREPLWVTALTWSGALLTV CCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCHHHHEECCCEEEEEEECCCHHHHH LGVGVMFYGPTLFKKRSAVLEQPTEPITAEPTPLPLAPQDG HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA