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The map label for this gene is 158337395

Identifier: 158337395

GI number: 158337395

Start: 4293829

End: 4294728

Strand: Reverse

Name: 158337395

Synonym: AM1_4274

Alternate gene names: NA

Gene position: 4294728-4293829 (Counterclockwise)

Preceding gene: 158337399

Following gene: 158337392

Centisome position: 66.03

GC content: 55.11

Gene sequence:

>900_bases
ATGACTGCCTTACTCCCTGCCATCCTGCCAGTCAGCCTTATTATCTGCATTGGTTATCTAGCAGGCAAAACCCTAAAGCT
GGACTACCAAACCTTATCCCATCTGGCCATCTATATCCTGGTCCCAGCCCTGATTGCCAGTAGCCTCTATCGCAATACCC
TGTCACTCCAGAGCGCGGCAGGGTTGATCGCCGGATACCTGCTCACCACCCTGACCCTAGCGGTGATCGTTCTGCTTATC
AGCCGAGGGTTAAAACTTTCCCCCCCGGTCAAAATGAGTTTGCTAGCCACCACCCTCTTTGGCAATGTCGGTAACCTGGG
TTTACCGATGGTCTCCTTTACCTTAGGGGCAGCCGGATTGGAGCGGGCCATTATTTATCTCATTTCCGCCGCCATTTTGA
TGGCAGGAGTAGGACCGGCGTTACTGAATACATCAGGGCTTCGCGCTGGTCTCGCGTTAACTCTCAAGCTACCGCTATTT
TGGGCCATGCTGGCTGGGTTACTGCTCCAGGTCTCTGGGCTTCAGCTACCCTTCCGTCTCGATGAGGGAATCGCCATGTT
GGGGAATGCAGCCATCCCCATTGCCCTCGTCACCCTAGGCATGCAGCTAGCCCAAAACCCATTACAAATTGGCCAGTATG
AACTGATGGCTGCCAGCCTGCGGCTGCTCCTCGCGCCCCTGATCGCCCTAGGCATCGGCACCAGTCTACGACTCGCTCCT
TTAGATTTACAGGTGCTCGTGCTTCAAAGCGCCATGCCCACTGCCGTCAACACCCTGATTTGGGTTAATGAGTTTGGGGG
AGAGCCCGCCCGGGTTGCCCGCTCCATTATTGGCTCCACCTTACTCAGCCTAGTCACCTTACCCATACTGTTGGGGCTGA
TCCCATCGATCGGTCCTTAA

Upstream 100 bases:

>100_bases
ATACGGTGGGGCTGGTAACTTAGACATGACAATCAGCAATCCGAGTGACGCTCGCATAAATCCAACCTAGGATGACCTTA
CCCATTGATTGAGGGCTGCG

Downstream 100 bases:

>100_bases
GGGGCAGAGATTGCTGAGTCAGCCTTAACTGGCCTGGGGATTTTTCTTATTATTTAGAATCGTAAATTCATCTAGATCAT
CCTCAACGGTCGGAGAAGCT

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTALLPAILPVSLIICIGYLAGKTLKLDYQTLSHLAIYILVPALIASSLYRNTLSLQSAAGLIAGYLLTTLTLAVIVLLI
SRGLKLSPPVKMSLLATTLFGNVGNLGLPMVSFTLGAAGLERAIIYLISAAILMAGVGPALLNTSGLRAGLALTLKLPLF
WAMLAGLLLQVSGLQLPFRLDEGIAMLGNAAIPIALVTLGMQLAQNPLQIGQYELMAASLRLLLAPLIALGIGTSLRLAP
LDLQVLVLQSAMPTAVNTLIWVNEFGGEPARVARSIIGSTLLSLVTLPILLGLIPSIGP

Sequences:

>Translated_299_residues
MTALLPAILPVSLIICIGYLAGKTLKLDYQTLSHLAIYILVPALIASSLYRNTLSLQSAAGLIAGYLLTTLTLAVIVLLI
SRGLKLSPPVKMSLLATTLFGNVGNLGLPMVSFTLGAAGLERAIIYLISAAILMAGVGPALLNTSGLRAGLALTLKLPLF
WAMLAGLLLQVSGLQLPFRLDEGIAMLGNAAIPIALVTLGMQLAQNPLQIGQYELMAASLRLLLAPLIALGIGTSLRLAP
LDLQVLVLQSAMPTAVNTLIWVNEFGGEPARVARSIIGSTLLSLVTLPILLGLIPSIGP
>Mature_298_residues
TALLPAILPVSLIICIGYLAGKTLKLDYQTLSHLAIYILVPALIASSLYRNTLSLQSAAGLIAGYLLTTLTLAVIVLLIS
RGLKLSPPVKMSLLATTLFGNVGNLGLPMVSFTLGAAGLERAIIYLISAAILMAGVGPALLNTSGLRAGLALTLKLPLFW
AMLAGLLLQVSGLQLPFRLDEGIAMLGNAAIPIALVTLGMQLAQNPLQIGQYELMAASLRLLLAPLIALGIGTSLRLAPL
DLQVLVLQSAMPTAVNTLIWVNEFGGEPARVARSIIGSTLLSLVTLPILLGLIPSIGP

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 31119; Mature: 30988

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLPAILPVSLIICIGYLAGKTLKLDYQTLSHLAIYILVPALIASSLYRNTLSLQSAA
CCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIAGYLLTTLTLAVIVLLISRGLKLSPPVKMSLLATTLFGNVGNLGLPMVSFTLGAAGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ERAIIYLISAAILMAGVGPALLNTSGLRAGLALTLKLPLFWAMLAGLLLQVSGLQLPFRL
HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
DEGIAMLGNAAIPIALVTLGMQLAQNPLQIGQYELMAASLRLLLAPLIALGIGTSLRLAP
CCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
LDLQVLVLQSAMPTAVNTLIWVNEFGGEPARVARSIIGSTLLSLVTLPILLGLIPSIGP
CHHHHHHHHHHCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TALLPAILPVSLIICIGYLAGKTLKLDYQTLSHLAIYILVPALIASSLYRNTLSLQSAA
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIAGYLLTTLTLAVIVLLISRGLKLSPPVKMSLLATTLFGNVGNLGLPMVSFTLGAAGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ERAIIYLISAAILMAGVGPALLNTSGLRAGLALTLKLPLFWAMLAGLLLQVSGLQLPFRL
HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
DEGIAMLGNAAIPIALVTLGMQLAQNPLQIGQYELMAASLRLLLAPLIALGIGTSLRLAP
CCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
LDLQVLVLQSAMPTAVNTLIWVNEFGGEPARVARSIIGSTLLSLVTLPILLGLIPSIGP
CHHHHHHHHHHCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]