| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337399
Identifier: 158337399
GI number: 158337399
Start: 4296768
End: 4297877
Strand: Reverse
Name: 158337399
Synonym: AM1_4277
Alternate gene names: NA
Gene position: 4297877-4296768 (Counterclockwise)
Preceding gene: 158337402
Following gene: 158337395
Centisome position: 66.08
GC content: 48.11
Gene sequence:
>1110_bases GTGGTAGAGAGATTTGGCACACTGGGAGTATCCCCGCACCTATCCTCCACTCCCATGATTAAAATTGATTTCACCGCAGA GGAAATCCAACAACTCAATTACGAACGCTATCATCACCCTCACCCACGGGTGCAGCGACGGATGGAAGTGCTCTACTTGA AGAGTCAAGGTCTTTCCCATACCCAGATCTGCCAGCTTTGTCAGATTAGTCGCCCCACTTTAGCCAAAACTCTTCGTCAG TATCAACAAGGAGGGATTGAAGGGCTGAAGACCCTTGAATATAAAGGTCAACCGAGTCTACTCAACGCTCATAGCGATAG TGTGAGAGCTTACTTTGAGCAACATCCTCCCCGCACCAGTGCAGAAGCTCAAGCGGTCATTGAGCAATTAACAGGCATCA AACGCAGTCCCACCCAAATCAAAGCCTTCCTCAAACGCATCGGTTGTCGTTATCGAAAAGTGGGGTATGTGCCGGGAAAG TCGAGTCTGCCCGAGAAAATTGAGGAGCAAGAGCAGTTTCGACACACTCGCCTTGAACCCTTATTAGAGGAAGCTCAACG CCAAGAGCGTCTTGTCTTTTTTGTGGATGCTGCTCACTTTGTTCACCGTGCTTATCTAGGGTTTGTCTGGTGCATCACTC GGATCTTCATCCCTTCTCCTTCTGGTCGCCAACGTTTCAATGTCCTGGGCGCGCTCGACGCTATCACCAAAGACCTAGTC AGCGTTACCAACCACACCTATATCAATTCTCACAGTATGTGCCTGTTACTGGCCAAGCTGGCGCTACTTGACCCAGTCAT ACCCATCAGCGTGATTTTAGACAATGCGCGATACCAGAAATGTCAGCTTGTAACGGACTTTGCCGAGATCGTCGATATTG AGCTGGTCTATCTGCCCTCCTATTCACCCCATTTGAATTTGATTGAGCGACTCTGGCGTTTTGTACGCAAGGAATGTCTC TATTCAAAGTATTATGCTGATTTTCCCGCCTTCAAAGGGGCCATTCAACAGTGCATCGACCAGTGTAATGGAGAGCATAA GGCGAAACTCACCACCTTACTATCACTCAAGTTTCAGTCTTTTAAGAAAGTTAATATCTTAGCCGCCTAG
Upstream 100 bases:
>100_bases GTCCAAGGATCGTTACTCAATCGAAGTATTTCATAAGTCATAATTCGCATCACTGTAGAGATGGCAGCTATATACTGCGG ACGACTTGTGACTTAACATT
Downstream 100 bases:
>100_bases AGTATAACAGCCAATCGCATAGTACGCATTTTTACCAAAAATGGTGCTAGTAAATAAAAGATTAGCTCCAAGCTAATAGA CCAACCTTGAGGGATAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase Family Protein; Transposase And Inactivated Derivatives; Family Transposase; Transposase And Inactivated Derivatives-Like Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MVERFGTLGVSPHLSSTPMIKIDFTAEEIQQLNYERYHHPHPRVQRRMEVLYLKSQGLSHTQICQLCQISRPTLAKTLRQ YQQGGIEGLKTLEYKGQPSLLNAHSDSVRAYFEQHPPRTSAEAQAVIEQLTGIKRSPTQIKAFLKRIGCRYRKVGYVPGK SSLPEKIEEQEQFRHTRLEPLLEEAQRQERLVFFVDAAHFVHRAYLGFVWCITRIFIPSPSGRQRFNVLGALDAITKDLV SVTNHTYINSHSMCLLLAKLALLDPVIPISVILDNARYQKCQLVTDFAEIVDIELVYLPSYSPHLNLIERLWRFVRKECL YSKYYADFPAFKGAIQQCIDQCNGEHKAKLTTLLSLKFQSFKKVNILAA
Sequences:
>Translated_369_residues MVERFGTLGVSPHLSSTPMIKIDFTAEEIQQLNYERYHHPHPRVQRRMEVLYLKSQGLSHTQICQLCQISRPTLAKTLRQ YQQGGIEGLKTLEYKGQPSLLNAHSDSVRAYFEQHPPRTSAEAQAVIEQLTGIKRSPTQIKAFLKRIGCRYRKVGYVPGK SSLPEKIEEQEQFRHTRLEPLLEEAQRQERLVFFVDAAHFVHRAYLGFVWCITRIFIPSPSGRQRFNVLGALDAITKDLV SVTNHTYINSHSMCLLLAKLALLDPVIPISVILDNARYQKCQLVTDFAEIVDIELVYLPSYSPHLNLIERLWRFVRKECL YSKYYADFPAFKGAIQQCIDQCNGEHKAKLTTLLSLKFQSFKKVNILAA >Mature_369_residues MVERFGTLGVSPHLSSTPMIKIDFTAEEIQQLNYERYHHPHPRVQRRMEVLYLKSQGLSHTQICQLCQISRPTLAKTLRQ YQQGGIEGLKTLEYKGQPSLLNAHSDSVRAYFEQHPPRTSAEAQAVIEQLTGIKRSPTQIKAFLKRIGCRYRKVGYVPGK SSLPEKIEEQEQFRHTRLEPLLEEAQRQERLVFFVDAAHFVHRAYLGFVWCITRIFIPSPSGRQRFNVLGALDAITKDLV SVTNHTYINSHSMCLLLAKLALLDPVIPISVILDNARYQKCQLVTDFAEIVDIELVYLPSYSPHLNLIERLWRFVRKECL YSKYYADFPAFKGAIQQCIDQCNGEHKAKLTTLLSLKFQSFKKVNILAA
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42445; Mature: 42445
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERFGTLGVSPHLSSTPMIKIDFTAEEIQQLNYERYHHPHPRVQRRMEVLYLKSQGLSH CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCH TQICQLCQISRPTLAKTLRQYQQGGIEGLKTLEYKGQPSLLNAHSDSVRAYFEQHPPRTS HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCC AEAQAVIEQLTGIKRSPTQIKAFLKRIGCRYRKVGYVPGKSSLPEKIEEQEQFRHTRLEP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LLEEAQRQERLVFFVDAAHFVHRAYLGFVWCITRIFIPSPSGRQRFNVLGALDAITKDLV HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SVTNHTYINSHSMCLLLAKLALLDPVIPISVILDNARYQKCQLVTDFAEIVDIELVYLPS HHHCCCEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECC YSPHLNLIERLWRFVRKECLYSKYYADFPAFKGAIQQCIDQCNGEHKAKLTTLLSLKFQS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FKKVNILAA HCCEEEEEC >Mature Secondary Structure MVERFGTLGVSPHLSSTPMIKIDFTAEEIQQLNYERYHHPHPRVQRRMEVLYLKSQGLSH CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCH TQICQLCQISRPTLAKTLRQYQQGGIEGLKTLEYKGQPSLLNAHSDSVRAYFEQHPPRTS HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCC AEAQAVIEQLTGIKRSPTQIKAFLKRIGCRYRKVGYVPGKSSLPEKIEEQEQFRHTRLEP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LLEEAQRQERLVFFVDAAHFVHRAYLGFVWCITRIFIPSPSGRQRFNVLGALDAITKDLV HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SVTNHTYINSHSMCLLLAKLALLDPVIPISVILDNARYQKCQLVTDFAEIVDIELVYLPS HHHCCCEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECC YSPHLNLIERLWRFVRKECLYSKYYADFPAFKGAIQQCIDQCNGEHKAKLTTLLSLKFQS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FKKVNILAA HCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA