| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337242
Identifier: 158337242
GI number: 158337242
Start: 4153607
End: 4154344
Strand: Direct
Name: 158337242
Synonym: AM1_4119
Alternate gene names: NA
Gene position: 4153607-4154344 (Clockwise)
Preceding gene: 158337241
Following gene: 158337244
Centisome position: 63.87
GC content: 50.95
Gene sequence:
>738_bases TTGGCGTCTAGTTCATCCTCCAAACAGGCTAAACCGATCCATCGTATGGCTTGGCGTTTGGGTGTGTCGTTGACCTTGCT TCTAGGCTTGGGAGCGTTGTTTGTGCTGCCCAAGTTTGACCCCAAGAGTTTAACTTGGCCCACCACAGAGCCGGGTAGAA TTGCCCCACTAGCCATGTCTGGGGGCAATCCCTATCTTCGAGCTTTAATGCGGACGATTTCGGCCAGTGAATCGAATGAT GCTAGCCCCTACACCGTGCTTTATGGCGGTAGCCATATCGAAAATTTGCAGGAGCACCCCGATCGCTGTATTCCCATTCG ATGGGGACCCAATCAAGGGCTATGCACGACGGCGGCTGGGCGTTATCAGTTTATTACGACTACCTGGTTAGAAACTGCAG AGAAGTATCATCCTGCTCCGACGGGAGAATGGATGTGGCGACGCTATAGTTTTGCCCCAGAATACCAGGATCGAGTGGTC TATGCTTGGTTAGATGACGTCAATTATTGGGGAACAGATATTCCCCAACTCCTAGAAGATGGCCAGCTCCAAACGGTTCT TAAACGGCTTTCGGGAACGTGGACCAGTTTGGGCTATGGCATTGAGAGTAATAAGGTGACGCCCCACTTAATGCATATCT ATGAACGCATGCTTGCGGAAGAAATTGCCTTAGCCAATGGGTTACCCACCAACTATTTACCCACGGTGGCTAACCAATCC GTGGAAACGACGCGCTAG
Upstream 100 bases:
>100_bases TGAACTTAGTCGAGTTTCCAGCTGGGACTGACATAAGATCTCATTCATACTGGTTTAATCCTTTCAATCTAAGCCGTTTT ATTGCTTAGGGAGTTAACCT
Downstream 100 bases:
>100_bases GACTAAGCCTCTAACCGCTTCCATAAAGCCTGATAGAGACTATCGGGTACCTTGGCTCTGAGTACCTTCGCCAACCGATT TTTCTTCTGCGCTGCCTTGA
Product: phage lysozyme
Products: NA
Alternate protein names: Phage Lysozyme; Glycoside Hydrolase Family Protein; Family
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MASSSSSKQAKPIHRMAWRLGVSLTLLLGLGALFVLPKFDPKSLTWPTTEPGRIAPLAMSGGNPYLRALMRTISASESND ASPYTVLYGGSHIENLQEHPDRCIPIRWGPNQGLCTTAAGRYQFITTTWLETAEKYHPAPTGEWMWRRYSFAPEYQDRVV YAWLDDVNYWGTDIPQLLEDGQLQTVLKRLSGTWTSLGYGIESNKVTPHLMHIYERMLAEEIALANGLPTNYLPTVANQS VETTR
Sequences:
>Translated_245_residues MASSSSSKQAKPIHRMAWRLGVSLTLLLGLGALFVLPKFDPKSLTWPTTEPGRIAPLAMSGGNPYLRALMRTISASESND ASPYTVLYGGSHIENLQEHPDRCIPIRWGPNQGLCTTAAGRYQFITTTWLETAEKYHPAPTGEWMWRRYSFAPEYQDRVV YAWLDDVNYWGTDIPQLLEDGQLQTVLKRLSGTWTSLGYGIESNKVTPHLMHIYERMLAEEIALANGLPTNYLPTVANQS VETTR >Mature_244_residues ASSSSSKQAKPIHRMAWRLGVSLTLLLGLGALFVLPKFDPKSLTWPTTEPGRIAPLAMSGGNPYLRALMRTISASESNDA SPYTVLYGGSHIENLQEHPDRCIPIRWGPNQGLCTTAAGRYQFITTTWLETAEKYHPAPTGEWMWRRYSFAPEYQDRVVY AWLDDVNYWGTDIPQLLEDGQLQTVLKRLSGTWTSLGYGIESNKVTPHLMHIYERMLAEEIALANGLPTNYLPTVANQSV ETTR
Specific function: Unknown
COG id: COG4678
COG function: function code G; Muramidase (phage lambda lysozyme)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27503; Mature: 27371
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00359 RIBOSOMAL_L11
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSSSKQAKPIHRMAWRLGVSLTLLLGLGALFVLPKFDPKSLTWPTTEPGRIAPLAMS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEC GGNPYLRALMRTISASESNDASPYTVLYGGSHIENLQEHPDRCIPIRWGPNQGLCTTAAG CCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCCCEEECCC RYQFITTTWLETAEKYHPAPTGEWMWRRYSFAPEYQDRVVYAWLDDVNYWGTDIPQLLED CEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHC GQLQTVLKRLSGTWTSLGYGIESNKVTPHLMHIYERMLAEEIALANGLPTNYLPTVANQS CHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC VETTR CCCCC >Mature Secondary Structure ASSSSSKQAKPIHRMAWRLGVSLTLLLGLGALFVLPKFDPKSLTWPTTEPGRIAPLAMS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEC GGNPYLRALMRTISASESNDASPYTVLYGGSHIENLQEHPDRCIPIRWGPNQGLCTTAAG CCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCCCEEECCC RYQFITTTWLETAEKYHPAPTGEWMWRRYSFAPEYQDRVVYAWLDDVNYWGTDIPQLLED CEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHC GQLQTVLKRLSGTWTSLGYGIESNKVTPHLMHIYERMLAEEIALANGLPTNYLPTVANQS CHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC VETTR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA