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The map label for this gene is yhfK [H]

Identifier: 158337241

GI number: 158337241

Start: 4152841

End: 4153497

Strand: Direct

Name: yhfK [H]

Synonym: AM1_4118

Alternate gene names: 158337241

Gene position: 4152841-4153497 (Clockwise)

Preceding gene: 158337240

Following gene: 158337242

Centisome position: 63.85

GC content: 48.55

Gene sequence:

>657_bases
ATGAAAGCATTTGTGGCTGGAGCAACGGGTCAAACGGGTCGCCGCATTGTGTCTCAATTAGTTGAGCGGGGTATTCCCGT
GCGAGCTTTGGTTCGAGATATGGATAGAGCAAAAGCACTCTTACCGGAAGCTGCTGAGTTAGTGGTGGGCGATGTATTGG
ATGCGAGTTCGTTGGAGGATGCGATCGCAGATTGTAACGTCCTCCTTTGCGCCACCGGAGCGGCTCCTGGCTTTAATCCG
TTTGCACCCCTACAAATTGATTATCTGGGGACCAAAAACTTAGTAGATGTGGCCAAAGCTAAAAACATTGAGCATTTTGT
TTTGGTGTCTTCCCTGTGTACATCGAAGCTGCTGCATCCCCTGAATCTGTTCTTCTTGGTATTGGTTTGGAAGAAGCAGG
CCGAACAATATATTCAAAATAGCGGGCTCACCTATACCATCGTCCGTCCCGGCGGCCTGAAGAACGAGGATAATGATAAT
TCCGTCGTCATGTCTGCCCCCGATACTTTATTTGAAGGCAGCATTCCCCGGACCAAAGTGGCTGAAGTTTGTATTGAAGC
CCTGACGGCTGCATCCTCTCACAATAAGATTGTTGAAATCGTTGCCCCGTCTGAAGCGTTAGACCGACCAATCCCTGACT
TATTTGCTAGTGTTTAA

Upstream 100 bases:

>100_bases
GCAATGCAGTCAAGCAATCGTTAAACTGAAGAGATGAATGTCATCTTGTTTAAGGTGATTTCATTGTTTTTGATTGTGAC
GACGCAAGGATCATACGCAT

Downstream 100 bases:

>100_bases
GTGAGTATATGAACTTAGTCGAGTTTCCAGCTGGGACTGACATAAGATCTCATTCATACTGGTTTAATCCTTTCAATCTA
AGCCGTTTTATTGCTTAGGG

Product: NAD dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKAFVAGATGQTGRRIVSQLVERGIPVRALVRDMDRAKALLPEAAELVVGDVLDASSLEDAIADCNVLLCATGAAPGFNP
FAPLQIDYLGTKNLVDVAKAKNIEHFVLVSSLCTSKLLHPLNLFFLVLVWKKQAEQYIQNSGLTYTIVRPGGLKNEDNDN
SVVMSAPDTLFEGSIPRTKVAEVCIEALTAASSHNKIVEIVAPSEALDRPIPDLFASV

Sequences:

>Translated_218_residues
MKAFVAGATGQTGRRIVSQLVERGIPVRALVRDMDRAKALLPEAAELVVGDVLDASSLEDAIADCNVLLCATGAAPGFNP
FAPLQIDYLGTKNLVDVAKAKNIEHFVLVSSLCTSKLLHPLNLFFLVLVWKKQAEQYIQNSGLTYTIVRPGGLKNEDNDN
SVVMSAPDTLFEGSIPRTKVAEVCIEALTAASSHNKIVEIVAPSEALDRPIPDLFASV
>Mature_218_residues
MKAFVAGATGQTGRRIVSQLVERGIPVRALVRDMDRAKALLPEAAELVVGDVLDASSLEDAIADCNVLLCATGAAPGFNP
FAPLQIDYLGTKNLVDVAKAKNIEHFVLVSSLCTSKLLHPLNLFFLVLVWKKQAEQYIQNSGLTYTIVRPGGLKNEDNDN
SVVMSAPDTLFEGSIPRTKVAEVCIEALTAASSHNKIVEIVAPSEALDRPIPDLFASV

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23368; Mature: 23368

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFVAGATGQTGRRIVSQLVERGIPVRALVRDMDRAKALLPEAAELVVGDVLDASSLED
CCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
AIADCNVLLCATGAAPGFNPFAPLQIDYLGTKNLVDVAKAKNIEHFVLVSSLCTSKLLHP
HHHCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNLFFLVLVWKKQAEQYIQNSGLTYTIVRPGGLKNEDNDNSVVMSAPDTLFEGSIPRTKV
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCHHHCCCCCHHHH
AEVCIEALTAASSHNKIVEIVAPSEALDRPIPDLFASV
HHHHHHHHHHCCCCCCEEEEEECHHHHCCCCHHHHHCC
>Mature Secondary Structure
MKAFVAGATGQTGRRIVSQLVERGIPVRALVRDMDRAKALLPEAAELVVGDVLDASSLED
CCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
AIADCNVLLCATGAAPGFNPFAPLQIDYLGTKNLVDVAKAKNIEHFVLVSSLCTSKLLHP
HHHCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNLFFLVLVWKKQAEQYIQNSGLTYTIVRPGGLKNEDNDNSVVMSAPDTLFEGSIPRTKV
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCHHHCCCCCHHHH
AEVCIEALTAASSHNKIVEIVAPSEALDRPIPDLFASV
HHHHHHHHHHCCCCCCEEEEEECHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]