| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is metG [H]
Identifier: 158335466
GI number: 158335466
Start: 2313792
End: 2315390
Strand: Reverse
Name: metG [H]
Synonym: AM1_2314
Alternate gene names: 158335466
Gene position: 2315390-2313792 (Counterclockwise)
Preceding gene: 158335467
Following gene: 158335465
Centisome position: 35.6
GC content: 48.03
Gene sequence:
>1599_bases ATGACTTCCAGCCAAACCCGACGTTTTGCGCTGACCACGCCGCTCTATTACGTTAACGATTTACCCCATATTGGCAGTGC CTACACCACGATGGCTGCAGATGCGATCGCAAGATTCCATCGCTTACAAGGGCATGAAGTCTTGCTGATCACGGGGACAG ATGAGCATGGCCAAAAAATTCAGCGGACGGCTGAACAGCGGGGTAAAGCGCCACAAGACCACTGTGACGAAATCGTTGCT GGGTACAAAGATTTATGGCAACGCCTCAATATTCAATATGATCGCTTTAGTCGCACCACGAGCCCTCGCCATGGTCAGAT TGTGGCCGAGTTTTTTCAGCGGGTGTGGGATAAAGGTGACATTTGTCAAGGACATCAGCAGGGCTGGTATTGTGTCGGTT GCGAAGAATTTAAAGAAGAGCGCGACCTCCTCGAAGACAATCACTGTCCGATCCATAAGCGGCCGGTGGAATGGCGAGAC GAGCAAAATTATTTTTTCCGGCTGTCGAAGTATCAAGACGATCTACTTCAGTTATTTGCGGATCAGCCTGACTTTATCCA ACCCACCAGTCGCCGGAATGAAGTCCTCAGTTTTGTCGAACGGGGGTTACAGGACTTTTCCATTTCACGGGTGAACTTGG ATTGGGGATTTCCCGTACCGGCAGACGATCAGCACACCTTATATGTCTGGTTCGATGCCCTCCTCGGCTATGTCACAGCG CTGCTCGATGAAGATACAGAACCGACCTTAGATCAGGCCCTCAGTCAGTGGTGGCCCATCAATCTCCACTTAATTGGCAA AGATATTCTGCGGTTTCATGCAGTGTATTGGCCAGCAATGTTGATGTCGGCAGATCTGCCTTTGCCTGATCGGGTATTTG GTCATGGTTTCTTGACTAAAGATGGGCAAAAAATGGGGAAAAGCCTGGGGAATACCCTCGATCCCGTTGAATTGGTCGAC CGCTATGGAACGGATGCGGTTCGATACTACTTTTTAAAGGCCCTCGAGTTCGGTCGGGATGGCGACTTCAGTGAAACTCG CTTTATTGATGTCGTCAATGCTGATCTGGCCAATAGCCTAGGCAATTTACTGAATCGCACCCTTAAAATGGCCGTCAAAT ATTGTAATGGCCAGGTTCCCGATATTGATATTCAGAGTATTCCGGAGGATCATCCGTTGGCCCAACTGGGTCGAAAAGCG GGCGATCAGGTCGCAAAAGCTTACCAAAACTTAAATTTTAGTCAAGCTTGTAATATTTCTTTGGGGCTTGTCAAAGCTGG AAACCAGTTCATAGACGAGCAAGCACCCTGGTCTCTCTATAAAAAAGGGGAACAAGGCTTAGTCAACGAGATCCTTTACA CCGTTTTAGAATCGGTTAGACTGTCAGCATATCTGCTCACTCCGGTTATTCCTAACCTCAGTACACAGATATATCAACAG CTAGGGTTCAAGCTTGATTTGAATGTTAATCATGATGGGGATGAGACAACATTACATTCTATTCATAGCAACTGGGGAGG GTTGCCCGCTAACCAAATCTTAGGCACACCTCAACCCGTCTTCCAAAAATTAGAGCCTTTACAAGCTGCAGCACCCTAG
Upstream 100 bases:
>100_bases ATTGTACCTATTAAAAACATCATAATTAGGTATAAACGCCGTTCATTAATAGCTCATGTATGATGGAGGTCGGCAACCAC AATGCTTCTATCTTTAGCCT
Downstream 100 bases:
>100_bases CACTTTGCCGTCTTCACTTGAGGATTGTCTCAGGGTTACTGCACTGGTTTAGTCAATATATTTTAAAACCTGACATCATT TAAACATCCGAGGCTTTAAT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTSSQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTAEQRGKAPQDHCDEIVA GYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQGHQQGWYCVGCEEFKEERDLLEDNHCPIHKRPVEWRD EQNYFFRLSKYQDDLLQLFADQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTA LLDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTKDGQKMGKSLGNTLDPVELVD RYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSLGNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKA GDQVAKAYQNLNFSQACNISLGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQ LGFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKLEPLQAAAP
Sequences:
>Translated_532_residues MTSSQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTAEQRGKAPQDHCDEIVA GYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQGHQQGWYCVGCEEFKEERDLLEDNHCPIHKRPVEWRD EQNYFFRLSKYQDDLLQLFADQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTA LLDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTKDGQKMGKSLGNTLDPVELVD RYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSLGNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKA GDQVAKAYQNLNFSQACNISLGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQ LGFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKLEPLQAAAP >Mature_531_residues TSSQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTAEQRGKAPQDHCDEIVAG YKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQGHQQGWYCVGCEEFKEERDLLEDNHCPIHKRPVEWRDE QNYFFRLSKYQDDLLQLFADQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTAL LDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTKDGQKMGKSLGNTLDPVELVDR YGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSLGNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAG DQVAKAYQNLNFSQACNISLGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQL GFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKLEPLQAAAP
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
GO:0000166: Methionyl-tRNA synthetase
GO:0004812: Methionyl-tRNA synthetase
GO:0004825: Methionyl-tRNA synthetase
GO:0005524: Methionyl-tRNA synthetase
GO:0005737: Methionyl-tRNA synthetase
GO:0006412: Methionyl-tRNA synthetase
GO:0006418: Methionyl-tRNA synthetase
GO:0006431: Methionyl-tRNA synthetase
GO:0016874: Methionyl-tRNA synthetase
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=503, Percent_Identity=34.9900596421471, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI14043022, Length=567, Percent_Identity=26.63139329806, Blast_Score=169, Evalue=9e-42, Organism=Escherichia coli, GI1788432, Length=507, Percent_Identity=26.6272189349112, Blast_Score=187, Evalue=1e-48, Organism=Caenorhabditis elegans, GI212645096, Length=487, Percent_Identity=30.5954825462012, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17540794, Length=570, Percent_Identity=27.0175438596491, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71992781, Length=382, Percent_Identity=28.7958115183246, Blast_Score=185, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6321610, Length=510, Percent_Identity=31.3725490196078, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6321704, Length=517, Percent_Identity=23.21083172147, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI21358483, Length=506, Percent_Identity=35.1778656126482, Blast_Score=292, Evalue=5e-79, Organism=Drosophila melanogaster, GI24655311, Length=575, Percent_Identity=26.0869565217391, Blast_Score=164, Evalue=1e-40,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 60645; Mature: 60514
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKI CCCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH QRTAEQRGKAPQDHCDEIVAGYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCC ICQGHQQGWYCVGCEEFKEERDLLEDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFA CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHC DQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTA CCCCCCCCCHHHHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHH LLDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTK HHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC DGQKMGKSLGNTLDPVELVDRYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSL CHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH GNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAGDQVAKAYQNLNFSQACNIS HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCE LGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQ EEEECCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LGFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKLEPLQAAAP CCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TSSQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKI CCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH QRTAEQRGKAPQDHCDEIVAGYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCC ICQGHQQGWYCVGCEEFKEERDLLEDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFA CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHC DQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTA CCCCCCCCCHHHHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHH LLDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTK HHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC DGQKMGKSLGNTLDPVELVDRYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSL CHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH GNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAGDQVAKAYQNLNFSQACNIS HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCE LGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQ EEEECCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LGFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKLEPLQAAAP CCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]