| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335465
Identifier: 158335465
GI number: 158335465
Start: 2313055
End: 2313687
Strand: Reverse
Name: 158335465
Synonym: AM1_2313
Alternate gene names: NA
Gene position: 2313687-2313055 (Counterclockwise)
Preceding gene: 158335466
Following gene: 158335464
Centisome position: 35.57
GC content: 45.81
Gene sequence:
>633_bases ATGATTATCAATCCAGATATGGACCAAGACTCTGTGTTTTCAGCAGAGCAAGTACTTGAAAACCGTGGGCGTATCGCTAT TTTCATAGATGGGTCTAATCTTTTTTATGCTGCTCTGCAGTTGGGCATTGAGATTGACTACACCAAATTGTTATGCCGTC TGACCTGTGGTTCACGTTTATTGCGGTCCTTCTTTTATACCGGCGTTGATCCGACGAATGAAAAACAGCAGGGTTTCTTG CTGTGGATGCGCCGCAATGGGTATCGCGTCATTACAAAAGAGTTAGTCCAGCTGCCGGATGGTTCTAAAAAAGCCAATTT GGACGTTGAAATTGCCGTCGACATGATGTCGTTGGTAGGTTGTTACGATACAGCGATCTTAGTCAGTGGAGATGGCGACT TAGCCTATGCCGTAGATGCCGTTAGTTATCGAGGCATTCGTGTAGAAGTTGTTAGCTTGCGCTCCATGACCAGCGATAGC TTGATCAACGTTGCCGATCGCTACATTGATCTGGAAGGCATTAAAGGCGATATTCAAAAAGCCTCCCGTTCCGGTTATAC CTACCGTCCTTTATCAGGGATTACGATTGCGGAGCCAGAGACCGAAGATATCGTTGATCCTGCCTTTGATTAA
Upstream 100 bases:
>100_bases TTGCCGTCTTCACTTGAGGATTGTCTCAGGGTTACTGCACTGGTTTAGTCAATATATTTTAAAACCTGACATCATTTAAA CATCCGAGGCTTTAATTTCC
Downstream 100 bases:
>100_bases TTGGTTGTTTTGACGAGACCCTGTGCTGCCAGAGATGGAATTGATATTTCTCTGATTGGCCTGCTCAGTCTCATTGTTGT AGGCTGTGCGCCTGTCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIINPDMDQDSVFSAEQVLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQQGFL LWMRRNGYRVITKELVQLPDGSKKANLDVEIAVDMMSLVGCYDTAILVSGDGDLAYAVDAVSYRGIRVEVVSLRSMTSDS LINVADRYIDLEGIKGDIQKASRSGYTYRPLSGITIAEPETEDIVDPAFD
Sequences:
>Translated_210_residues MIINPDMDQDSVFSAEQVLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQQGFL LWMRRNGYRVITKELVQLPDGSKKANLDVEIAVDMMSLVGCYDTAILVSGDGDLAYAVDAVSYRGIRVEVVSLRSMTSDS LINVADRYIDLEGIKGDIQKASRSGYTYRPLSGITIAEPETEDIVDPAFD >Mature_210_residues MIINPDMDQDSVFSAEQVLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQQGFL LWMRRNGYRVITKELVQLPDGSKKANLDVEIAVDMMSLVGCYDTAILVSGDGDLAYAVDAVSYRGIRVEVVSLRSMTSDS LINVADRYIDLEGIKGDIQKASRSGYTYRPLSGITIAEPETEDIVDPAFD
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23359; Mature: 23359
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINPDMDQDSVFSAEQVLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRL CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCEECHHHHHHHHHHHHHH LRSFFYTGVDPTNEKQQGFLLWMRRNGYRVITKELVQLPDGSKKANLDVEIAVDMMSLVG HHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHH CYDTAILVSGDGDLAYAVDAVSYRGIRVEVVSLRSMTSDSLINVADRYIDLEGIKGDIQK HCCEEEEEECCCCEEEEEECCEECCEEEEEEEECCCCCCHHHHHHHHEEEECCCCHHHHH ASRSGYTYRPLSGITIAEPETEDIVDPAFD HHCCCCEECCCCCEEECCCCCHHCCCCCCC >Mature Secondary Structure MIINPDMDQDSVFSAEQVLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRL CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCEECHHHHHHHHHHHHHH LRSFFYTGVDPTNEKQQGFLLWMRRNGYRVITKELVQLPDGSKKANLDVEIAVDMMSLVG HHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHH CYDTAILVSGDGDLAYAVDAVSYRGIRVEVVSLRSMTSDSLINVADRYIDLEGIKGDIQK HCCEEEEEECCCCEEEEEECCEECCEEEEEEEECCCCCCHHHHHHHHEEEECCCCHHHHH ASRSGYTYRPLSGITIAEPETEDIVDPAFD HHCCCCEECCCCCEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA