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The map label for this gene is ydiF [H]

Identifier: 158335103

GI number: 158335103

Start: 1937063

End: 1938766

Strand: Direct

Name: ydiF [H]

Synonym: AM1_1944

Alternate gene names: 158335103

Gene position: 1937063-1938766 (Clockwise)

Preceding gene: 158335102

Following gene: 158335104

Centisome position: 29.78

GC content: 50.23

Gene sequence:

>1704_bases
ATGCTAAGACTGGAACATATTGGTAAGGTCTACCCCACGGGCGAAATCCTCAAGGATGTGAATTGGGAGCTAAAGCCTGG
CGACCGGATCGGCTTAGTGGGCGTCAATGGTGCGGGTAAATCCACTCAACTCAAAATTATTGCTGGCGAAGTTGAGCCAA
CCTCAGGAGAAGTCATTCGTCCCAACAGCCTACATATTGCCTATCTCAACCAGGAGTTCGATGTCGTCACGAGTCGAACG
GTACGGGAAGAATTTTGGACCGTTTTTACAGAAGCCAACCAAGTTCAGCAACAACAGCACCACGTCCAACAGCAAATGGA
AAGTGCTGCCCCAAACACCCTCGACGACTTAATCCATCAACTGGATCGACTACAGCGCCAGTTTGAGGCTTTAGATGGCT
ACGGCCTCGAGTCTCGCATTGAAAAAATCTTGCCGGAGATGGGCTTTAGCGCCGAAGATGGAGACCGTTTAGTCAGTGCT
TTTAGTGGCGGTTGGCAGATGCGGATGTGCTTAGGCAAAATCCTGCTGCAAAGCCCTGACATTCTGCTACTGGACGAGCC
GACTAACCATCTGGATCTAGAAACCATTGAGTGGTTAGAAACCTATTTAAAGGGACTCACGACCCCCATGGTCATTGTGT
CCCACGATCGGGCCTTTATGGATCGGCTCTGTAACCGCATTGTCGAAACCGAGCGGGGAGTGGCGACCTCTTATTTGGGC
AACTATTCTGCCTACATCCAACAGAAAACAGAACAGCAGTCAGCCCAACTCAGTGCTTTTGAACATCAGCAAAAAGAACT
TGAAAAACAGCAGGCCTATGTCGATCGGTTTCGCGCCAGCGCCACCCGCAGTACCCAGGCTAAAAGTCGCGAAAAACAGC
TCAATAAAGTCGAGCGCATAGAAGCCCCGACTGCCGACGTCCGCACCCTCAAGTTTCAGTTCCCTCCTGCTCCTCGAAGT
GGTCGGGAAGTCGTCATCGTCAAGGATATGGTTAAAACCTATGGAGACGATATTCTTTTCCTAGGGGCCAATCTGTTGCT
GGAACGGGGCGATCGGGTGGCCATCTTAGGCCCGAATGGGGCTGGGAAATCCACCCTTCTACATATGCTAATGGGAACGG
AGCCCCCCGATGAAGGGACCGTCAAATTTGGAGAACATAACGTTATTCCAGGGTATTTTGAGCAAAATCAAGCTGAGGCT
TTGGATCTGTCAAAAACCGTGATGGACACCATTCATGATGAAGTGCCTGACTGGAAAAACGAAGAGGTCCGAACGCTGTT
GGGCCGCTTTCTCTTCAGTGGTGAAACTGCTTTCAAACAAGTGGAGGCCTTAAGTGGAGGAGAAAAAGCTCGGCTGGCCC
TAGCCAAGATGTTGCTCAGTCCCGTCAACTTACTCATCCTGGATGAGCCCACCAATCACCTCGATATTCCCGCGAAAGAG
ATGCTAGAAGCAGCGCTACAGGATTATGACGGCACGGTCGTGATTGTGTCCCATGACCGATATTTCATCTCCCAAGTCGC
AACTAAGATTGTGGAAATCAACGAGGGAGAATTGATTCTCTATCGAGGGGATTATCAGTACTACCAAGAGAAGCTAGCGG
CTGCAGCAGAGAAAGCGAAGCAAGAGAAAATTGCCGCTGAGAAGGCAGCCAAAGCTGAAGCAAAGCGGGCCAAAAAACGC
AAAAAAGCCAAAGCCAAAGTTTAG

Upstream 100 bases:

>100_bases
AATTCGTTACGAAGTCTAGACTATAATGAACTTTTGTTGCTGAAATACGGGATTGTCAAGGGAGAATTCCGTGAGCCTGC
TGTTGGTATCGGAGTTCTAA

Downstream 100 bases:

>100_bases
GAGTGGCCTGCGGTAAGATTGCAGCTGTTTTAGGCTATCAAACGACACCTTAACCCTGCTGAAAGACATCCGGTGGTCTA
TTTTTCTCCGTGCTAGAGTA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MLRLEHIGKVYPTGEILKDVNWELKPGDRIGLVGVNGAGKSTQLKIIAGEVEPTSGEVIRPNSLHIAYLNQEFDVVTSRT
VREEFWTVFTEANQVQQQQHHVQQQMESAAPNTLDDLIHQLDRLQRQFEALDGYGLESRIEKILPEMGFSAEDGDRLVSA
FSGGWQMRMCLGKILLQSPDILLLDEPTNHLDLETIEWLETYLKGLTTPMVIVSHDRAFMDRLCNRIVETERGVATSYLG
NYSAYIQQKTEQQSAQLSAFEHQQKELEKQQAYVDRFRASATRSTQAKSREKQLNKVERIEAPTADVRTLKFQFPPAPRS
GREVVIVKDMVKTYGDDILFLGANLLLERGDRVAILGPNGAGKSTLLHMLMGTEPPDEGTVKFGEHNVIPGYFEQNQAEA
LDLSKTVMDTIHDEVPDWKNEEVRTLLGRFLFSGETAFKQVEALSGGEKARLALAKMLLSPVNLLILDEPTNHLDIPAKE
MLEAALQDYDGTVVIVSHDRYFISQVATKIVEINEGELILYRGDYQYYQEKLAAAAEKAKQEKIAAEKAAKAEAKRAKKR
KKAKAKV

Sequences:

>Translated_567_residues
MLRLEHIGKVYPTGEILKDVNWELKPGDRIGLVGVNGAGKSTQLKIIAGEVEPTSGEVIRPNSLHIAYLNQEFDVVTSRT
VREEFWTVFTEANQVQQQQHHVQQQMESAAPNTLDDLIHQLDRLQRQFEALDGYGLESRIEKILPEMGFSAEDGDRLVSA
FSGGWQMRMCLGKILLQSPDILLLDEPTNHLDLETIEWLETYLKGLTTPMVIVSHDRAFMDRLCNRIVETERGVATSYLG
NYSAYIQQKTEQQSAQLSAFEHQQKELEKQQAYVDRFRASATRSTQAKSREKQLNKVERIEAPTADVRTLKFQFPPAPRS
GREVVIVKDMVKTYGDDILFLGANLLLERGDRVAILGPNGAGKSTLLHMLMGTEPPDEGTVKFGEHNVIPGYFEQNQAEA
LDLSKTVMDTIHDEVPDWKNEEVRTLLGRFLFSGETAFKQVEALSGGEKARLALAKMLLSPVNLLILDEPTNHLDIPAKE
MLEAALQDYDGTVVIVSHDRYFISQVATKIVEINEGELILYRGDYQYYQEKLAAAAEKAKQEKIAAEKAAKAEAKRAKKR
KKAKAKV
>Mature_567_residues
MLRLEHIGKVYPTGEILKDVNWELKPGDRIGLVGVNGAGKSTQLKIIAGEVEPTSGEVIRPNSLHIAYLNQEFDVVTSRT
VREEFWTVFTEANQVQQQQHHVQQQMESAAPNTLDDLIHQLDRLQRQFEALDGYGLESRIEKILPEMGFSAEDGDRLVSA
FSGGWQMRMCLGKILLQSPDILLLDEPTNHLDLETIEWLETYLKGLTTPMVIVSHDRAFMDRLCNRIVETERGVATSYLG
NYSAYIQQKTEQQSAQLSAFEHQQKELEKQQAYVDRFRASATRSTQAKSREKQLNKVERIEAPTADVRTLKFQFPPAPRS
GREVVIVKDMVKTYGDDILFLGANLLLERGDRVAILGPNGAGKSTLLHMLMGTEPPDEGTVKFGEHNVIPGYFEQNQAEA
LDLSKTVMDTIHDEVPDWKNEEVRTLLGRFLFSGETAFKQVEALSGGEKARLALAKMLLSPVNLLILDEPTNHLDIPAKE
MLEAALQDYDGTVVIVSHDRYFISQVATKIVEINEGELILYRGDYQYYQEKLAAAAEKAKQEKIAAEKAAKAEAKRAKKR
KKAKAKV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=542, Percent_Identity=31.3653136531365, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=33.5849056603774, Blast_Score=263, Evalue=4e-70,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=33.2075471698113, Blast_Score=262, Evalue=6e-70,
Organism=Homo sapiens, GI10947135, Length=532, Percent_Identity=31.390977443609, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=31.390977443609, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI255708477, Length=245, Percent_Identity=28.1632653061224, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI1789751, Length=553, Percent_Identity=33.8155515370705, Blast_Score=330, Evalue=2e-91,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=35.3932584269663, Blast_Score=327, Evalue=1e-90,
Organism=Escherichia coli, GI2367384, Length=557, Percent_Identity=35.3680430879713, Blast_Score=311, Evalue=5e-86,
Organism=Escherichia coli, GI1787182, Length=510, Percent_Identity=34.9019607843137, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI48994997, Length=250, Percent_Identity=28, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=30, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788761, Length=236, Percent_Identity=27.9661016949153, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI48995001, Length=562, Percent_Identity=21.8861209964413, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=209, Percent_Identity=29.6650717703349, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1787758, Length=231, Percent_Identity=29.8701298701299, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1789891, Length=262, Percent_Identity=25.1908396946565, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788506, Length=229, Percent_Identity=24.8908296943231, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=24.5762711864407, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790544, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693107, Length=233, Percent_Identity=25.7510729613734, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789873, Length=240, Percent_Identity=25, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=29.9019607843137, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787105, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787089, Length=257, Percent_Identity=27.2373540856031, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=209, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=205, Percent_Identity=25.3658536585366, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=27.1604938271605, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=542, Percent_Identity=31.9188191881919, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17555318, Length=543, Percent_Identity=30.5709023941068, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=29.608938547486, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=264, Percent_Identity=26.8939393939394, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=241, Percent_Identity=28.2157676348548, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=23.8738738738739, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=183, Percent_Identity=32.2404371584699, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=541, Percent_Identity=30.4990757855823, Blast_Score=263, Evalue=6e-71,
Organism=Saccharomyces cerevisiae, GI6320874, Length=545, Percent_Identity=31.1926605504587, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6324314, Length=389, Percent_Identity=29.305912596401, Blast_Score=139, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6325030, Length=388, Percent_Identity=30.1546391752577, Blast_Score=133, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=392, Percent_Identity=27.2959183673469, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323217, Length=207, Percent_Identity=26.5700483091787, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=31.6849816849817, Blast_Score=272, Evalue=4e-73,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=31.6849816849817, Blast_Score=272, Evalue=4e-73,
Organism=Drosophila melanogaster, GI24666836, Length=515, Percent_Identity=33.0097087378641, Blast_Score=270, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=31.3186813186813, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24661270, Length=508, Percent_Identity=23.4251968503937, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355589, Length=508, Percent_Identity=23.4251968503937, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28574259, Length=194, Percent_Identity=26.2886597938144, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007184, Length=183, Percent_Identity=28.4153005464481, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221500365, Length=183, Percent_Identity=28.4153005464481, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281361582, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 63791; Mature: 63791

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLEHIGKVYPTGEILKDVNWELKPGDRIGLVGVNGAGKSTQLKIIAGEVEPTSGEVIR
CCCHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEC
PNSLHIAYLNQEFDVVTSRTVREEFWTVFTEANQVQQQQHHVQQQMESAAPNTLDDLIHQ
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDRLQRQFEALDGYGLESRIEKILPEMGFSAEDGDRLVSAFSGGWQMRMCLGKILLQSPD
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC
ILLLDEPTNHLDLETIEWLETYLKGLTTPMVIVSHDRAFMDRLCNRIVETERGVATSYLG
EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHC
NYSAYIQQKTEQQSAQLSAFEHQQKELEKQQAYVDRFRASATRSTQAKSREKQLNKVERI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAPTADVRTLKFQFPPAPRSGREVVIVKDMVKTYGDDILFLGANLLLERGDRVAILGPNG
CCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCCCEEEECHHHHHCCCCEEEEECCCC
AGKSTLLHMLMGTEPPDEGTVKFGEHNVIPGYFEQNQAEALDLSKTVMDTIHDEVPDWKN
CCHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
EEVRTLLGRFLFSGETAFKQVEALSGGEKARLALAKMLLSPVNLLILDEPTNHLDIPAKE
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH
MLEAALQDYDGTVVIVSHDRYFISQVATKIVEINEGELILYRGDYQYYQEKLAAAAEKAK
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHH
QEKIAAEKAAKAEAKRAKKRKKAKAKV
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRLEHIGKVYPTGEILKDVNWELKPGDRIGLVGVNGAGKSTQLKIIAGEVEPTSGEVIR
CCCHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEC
PNSLHIAYLNQEFDVVTSRTVREEFWTVFTEANQVQQQQHHVQQQMESAAPNTLDDLIHQ
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDRLQRQFEALDGYGLESRIEKILPEMGFSAEDGDRLVSAFSGGWQMRMCLGKILLQSPD
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC
ILLLDEPTNHLDLETIEWLETYLKGLTTPMVIVSHDRAFMDRLCNRIVETERGVATSYLG
EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHC
NYSAYIQQKTEQQSAQLSAFEHQQKELEKQQAYVDRFRASATRSTQAKSREKQLNKVERI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAPTADVRTLKFQFPPAPRSGREVVIVKDMVKTYGDDILFLGANLLLERGDRVAILGPNG
CCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCCCEEEECHHHHHCCCCEEEEECCCC
AGKSTLLHMLMGTEPPDEGTVKFGEHNVIPGYFEQNQAEALDLSKTVMDTIHDEVPDWKN
CCHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
EEVRTLLGRFLFSGETAFKQVEALSGGEKARLALAKMLLSPVNLLILDEPTNHLDIPAKE
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH
MLEAALQDYDGTVVIVSHDRYFISQVATKIVEINEGELILYRGDYQYYQEKLAAAAEKAK
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHH
QEKIAAEKAAKAEAKRAKKRKKAKAKV
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]