| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334897
Identifier: 158334897
GI number: 158334897
Start: 1720343
End: 1720915
Strand: Reverse
Name: 158334897
Synonym: AM1_1734
Alternate gene names: NA
Gene position: 1720915-1720343 (Counterclockwise)
Preceding gene: 158334899
Following gene: 158334891
Centisome position: 26.46
GC content: 52.88
Gene sequence:
>573_bases TTGACTGCCTTATCGTTGGTCGTTTTGTATAACGCTATCAATACTCCCTTCAGCCATGCTGCTCAGCTTGGTCTTGGGGA TTCGATTGAGGCTGACTCAAAGCTCAATACAGAGACCGCTCAAAGCGATGTTTGTGAAGAAGAGCCCATTATTTCCCCTG AAGCTTTACAAGAATCCTCGGGGCCATTGAGCCAATCTTCGGGACCCAACTTGCTGGCTAATGCGACCACCTCGGATGTG TCAACCGGATTGCTGTCCTCTCAGACCCTCATTGCAGAGAATGGGTTGATTGATTGTGGAATTGGCGGTGTCGCCCCTGA AGGGGGTCTTCCCGCTGCCGCAGGTTTCCCTTTGGCAGCTGCATTGATTCCAGCAGGCGCAGCAGCAGCAGCGATTCCTT TTGTGGTTGGAGGCGATGATGATCCCGCTGACCCTGCACCTCCAGTAATTGACCCTCCTGATCCAGCTCCTCCTAGCGTT CCTGAGCCTGCTGAAGCGGCTACCGCTGGTTTATTTGCCTGCTTGGGAGTTGTTGGTGTGTTGGCTAAACGGAAGATGAA CCGTTCTCGCTAA
Upstream 100 bases:
>100_bases ATTTCGCAGATTTATGGTAGCTTCGTCTTCGAATATCAAGCGGGGAAAACTATCTAAGGATCGAATCTCAACTATGAAAT TGTTAAAGACATGTGGCTCA
Downstream 100 bases:
>100_bases TATTCTCAGACTGCAGACTCGCATAGCCTGGGTGATTATATTCGACCATTCAGGTTGTGGATCAAAATTCGATCCTTAAT AAATGCCTTGAAGAAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTALSLVVLYNAINTPFSHAAQLGLGDSIEADSKLNTETAQSDVCEEEPIISPEALQESSGPLSQSSGPNLLANATTSDV STGLLSSQTLIAENGLIDCGIGGVAPEGGLPAAAGFPLAAALIPAGAAAAAIPFVVGGDDDPADPAPPVIDPPDPAPPSV PEPAEAATAGLFACLGVVGVLAKRKMNRSR
Sequences:
>Translated_190_residues MTALSLVVLYNAINTPFSHAAQLGLGDSIEADSKLNTETAQSDVCEEEPIISPEALQESSGPLSQSSGPNLLANATTSDV STGLLSSQTLIAENGLIDCGIGGVAPEGGLPAAAGFPLAAALIPAGAAAAAIPFVVGGDDDPADPAPPVIDPPDPAPPSV PEPAEAATAGLFACLGVVGVLAKRKMNRSR >Mature_189_residues TALSLVVLYNAINTPFSHAAQLGLGDSIEADSKLNTETAQSDVCEEEPIISPEALQESSGPLSQSSGPNLLANATTSDVS TGLLSSQTLIAENGLIDCGIGGVAPEGGLPAAAGFPLAAALIPAGAAAAAIPFVVGGDDDPADPAPPVIDPPDPAPPSVP EPAEAATAGLFACLGVVGVLAKRKMNRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18773; Mature: 18642
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSLVVLYNAINTPFSHAAQLGLGDSIEADSKLNTETAQSDVCEEEPIISPEALQESS CCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCC GPLSQSSGPNLLANATTSDVSTGLLSSQTLIAENGLIDCGIGGVAPEGGLPAAAGFPLAA CCCCCCCCCCEEEECCCHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHH ALIPAGAAAAAIPFVVGGDDDPADPAPPVIDPPDPAPPSVPEPAEAATAGLFACLGVVGV HHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAKRKMNRSR HHHHHHHCCC >Mature Secondary Structure TALSLVVLYNAINTPFSHAAQLGLGDSIEADSKLNTETAQSDVCEEEPIISPEALQESS CHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCC GPLSQSSGPNLLANATTSDVSTGLLSSQTLIAENGLIDCGIGGVAPEGGLPAAAGFPLAA CCCCCCCCCCEEEECCCHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHH ALIPAGAAAAAIPFVVGGDDDPADPAPPVIDPPDPAPPSVPEPAEAATAGLFACLGVVGV HHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAKRKMNRSR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA