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The map label for this gene is atpH

Identifier: 158334079

GI number: 158334079

Start: 864459

End: 865016

Strand: Direct

Name: atpH

Synonym: AM1_0895

Alternate gene names: 158334079

Gene position: 864459-865016 (Clockwise)

Preceding gene: 158334078

Following gene: 158334080

Centisome position: 13.29

GC content: 46.42

Gene sequence:

>558_bases
ATGACACAAAGCACGGTTAGCTCCACAATTGTTGAACCCTATGCCGAGGCGCTAATGTCTGTGGCCCAAAGCAACAATCT
CACCAACCAAATTGGTGAAGACGTGAGCTTTGTCCTCAGTCTGTTGCAAACCTCTGATGACCTGAAAGATTTCTTGGTCA
ATCCACTCACCCCCGCCGATGCCCAGAAGGCCGTTCTCCGGCAGTTGGCTGAATCGCGGGTCCAGAAGCAGTTTTTTAAT
TTTTTACTGCTCTTGATTGATCGACGACGCATCATCTTCTTAGAAGGTATTTGCAAGTACTATCAGGCATTACTACGCAA
ACTCAATAACACGGTTTTGGCAGAAGTAACCTCAACGGTAGAACTTACCGATGAGCAACGTCATGCCATCACTGACAAAG
TGAAACATATGAGTCAAGCGGCCCAGGTTGATCTTGAAACAAGCATCGATCCTGACCTCATTGGCGGAGTGATTATTAAA
ATTGGCTCTCAAGTTTTAGACGCCAGCATTCGTGGCCAGTTGCGCCGGATGAATTCTTCTATAACAAGCCTGTCTTAA

Upstream 100 bases:

>100_bases
TAGAGAAAGTTGAAGCTGATTTGAAAAATCAGTTAGGGAATAATGAATCCGCCCAGCGGAAATTAGTCGATCAAAGCATT
GCCTTGCTAGGAGGCAACTC

Downstream 100 bases:

>100_bases
GGTAATGGCAATTTTCTTAATTGCCGCTTAAGTTGTTTGACCTTTACCCACATCACAAATCAGAGCAAGTCCCATGGTAA
GCATCAGACCCGACGAAATT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTQSTVSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPADAQKAVLRQLAESRVQKQFFN
FLLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTVELTDEQRHAITDKVKHMSQAAQVDLETSIDPDLIGGVIIK
IGSQVLDASIRGQLRRMNSSITSLS

Sequences:

>Translated_185_residues
MTQSTVSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPADAQKAVLRQLAESRVQKQFFN
FLLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTVELTDEQRHAITDKVKHMSQAAQVDLETSIDPDLIGGVIIK
IGSQVLDASIRGQLRRMNSSITSLS
>Mature_184_residues
TQSTVSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPADAQKAVLRQLAESRVQKQFFNF
LLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTVELTDEQRHAITDKVKHMSQAAQVDLETSIDPDLIGGVIIKI
GSQVLDASIRGQLRRMNSSITSLS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:
GO:0005886: ATP synthase subunit delta
GO:0006754: ATP synthase subunit delta
GO:0006810: ATP synthase subunit delta
GO:0006811: ATP synthase subunit delta
GO:0009579: ATP synthase subunit delta
GO:0015986: ATP synthase subunit delta
GO:0015992: ATP synthase subunit delta
GO:0016020: ATP synthase subunit delta
GO:0042651: ATP synthase subunit delta
GO:0045261: ATP synthase subunit delta
GO:0046933: ATP synthase subunit delta

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=172, Percent_Identity=23.8372093023256, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71984717, Length=172, Percent_Identity=23.8372093023256, Blast_Score=77, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_ACAM1 (B0BZL1)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001515251.1
- ProteinModelPortal:   B0BZL1
- GeneID:   5679721
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_0895
- HOGENOM:   HBG668108
- OMA:   NANKDFV
- ProtClustDB:   PRK05758
- BioCyc:   AMAR329726:AM1_0895-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20567; Mature: 20436

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTVSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPAD
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AQKAVLRQLAESRVQKQFFNFLLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ELTDEQRHAITDKVKHMSQAAQVDLETSIDPDLIGGVIIKIGSQVLDASIRGQLRRMNSS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSLS
HHCCC
>Mature Secondary Structure 
TQSTVSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPAD
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AQKAVLRQLAESRVQKQFFNFLLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ELTDEQRHAITDKVKHMSQAAQVDLETSIDPDLIGGVIIKIGSQVLDASIRGQLRRMNSS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSLS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA