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The map label for this gene is atpF

Identifier: 158334078

GI number: 158334078

Start: 863902

End: 864462

Strand: Direct

Name: atpF

Synonym: AM1_0894

Alternate gene names: 158334078

Gene position: 863902-864462 (Clockwise)

Preceding gene: 158334077

Following gene: 158334079

Centisome position: 13.28

GC content: 46.35

Gene sequence:

>561_bases
ATGGGGATGTTTAATTGGCTGGCAAGCGCTGGCATGACTGGGTTTCCACAACTAGCTGAGGCTGGTGGTTACAGCCTTAA
CTTTGATATTTTGGAAGCCAATCTCGTCAATTTGGTAATCGTTATCGGATTACTGATTTATTTTGGTCGAGGCTTTTTAG
GGGAGTCCCTAGTAAAGCGACGAGAAGCCATTGAAACCGCAATCTCCGAAGCTGAAGCCAATCAAGAGAAGGCTGCTGCA
ACTTTGGCAGAAGAGCAAGAGAAGCTTGCTCAAGCTCAAGCAGAAGCGAAAAAGATTTTGGCGAATGCTCAGACCAATGC
AAGTAAAGCGAAGGAGCAAATCCTGGCTGAAGCAAAAACCGAGATTCAACGCATCAAAGATGCTGGTTCTCAAGACACTT
CTGCGAGTCAGGAACGTGCGATCGCAGAAATTCGACAGCGCGTTACCGCTATGGCCCTAGAGAAAGTTGAAGCTGATTTG
AAAAATCAGTTAGGGAATAATGAATCCGCCCAGCGGAAATTAGTCGATCAAAGCATTGCCTTGCTAGGAGGCAACTCATG
A

Upstream 100 bases:

>100_bases
TAGAGAAGCAGGTTGATACCCTCAGCCAGCAAATTCTCAATAAGCTCTTAGGCTCCACCCTGGCATAAGCCATCACCGCA
CCGCAGTTAGGACTATAAAC

Downstream 100 bases:

>100_bases
CACAAAGCACGGTTAGCTCCACAATTGTTGAACCCTATGCCGAGGCGCTAATGTCTGTGGCCCAAAGCAACAATCTCACC
AACCAAATTGGTGAAGACGT

Product: ATP synthase B chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 1; ATPase subunit I 1; F-type ATPase subunit b 1; F-ATPase subunit b 1

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKRREAIETAISEAEANQEKAAA
TLAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKTEIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADL
KNQLGNNESAQRKLVDQSIALLGGNS

Sequences:

>Translated_186_residues
MGMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKRREAIETAISEAEANQEKAAA
TLAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKTEIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADL
KNQLGNNESAQRKLVDQSIALLGGNS
>Mature_185_residues
GMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKRREAIETAISEAEANQEKAAAT
LAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKTEIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADLK
NQLGNNESAQRKLVDQSIALLGGNS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF1_ACAM1 (B0BZL0)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001515250.1
- GeneID:   5679720
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_0894
- HOGENOM:   HBG708990
- OMA:   ESIRMES
- ProtClustDB:   CLSK2475766
- BioCyc:   AMAR329726:AM1_0894-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19993; Mature: 19862

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22e587d4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKR
CCHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
REAIETAISEAEANQEKAAATLAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADLKNQLGNNESAQRKLVDQSIA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLGGNS
HHCCCH
>Mature Secondary Structure 
GMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKR
CHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
REAIETAISEAEANQEKAAATLAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADLKNQLGNNESAQRKLVDQSIA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLGGNS
HHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA