| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333706
Identifier: 158333706
GI number: 158333706
Start: 485925
End: 486413
Strand: Reverse
Name: 158333706
Synonym: AM1_0512
Alternate gene names: NA
Gene position: 486413-485925 (Counterclockwise)
Preceding gene: 158333709
Following gene: 158333705
Centisome position: 7.48
GC content: 45.6
Gene sequence:
>489_bases ATGGCTTACGATCCTCAGATTTACTCTTCCTACGAATTGAACTGGCAGTTGCACACTCAAGCAGGCAATCAGTGCCTGCT TGCAGGTTCATATCTGGAAGCGCTTCATGCCTATCGCAAAGCCATTGCCTTAGCTGAGTTAATGTTGATGACTGCCAAAA AAGAGCGTCGTCACCCGGAAGCTATCCATGCTTATGTGATGGCTTGCCACAATTTGGCCGATAATTTAGTAAAACTTGAG GATTTCCAGGTTGCAGAAACCACGATGCAACAAGCGTTGGATCGAGTGGTTGATTTGATGCATGCCACCCACTATTTTCA ATGCCTCCGCATCGAAGCTGCAAAAGCATTGAAAATGGTTAGCCTCAAGGTCTATGAGTTTTATCTGCGTCTAGGACAGC AGGATAAAGCTCGCAGGGTGTTCGAACATAACACTGAGCTTGCTCAGATGTTTTTTAGTCAGATACAACCCCGGTTGTTG AGTGTATAG
Upstream 100 bases:
>100_bases GTTCAAGGCTGAAAAAAAGATATTTAATTCATACCCTGACGGTAGAAATAGTTGATCGACGGGTAATCCTGGTCTACTTC ACTCAAAAGAATCGCTCGAT
Downstream 100 bases:
>100_bases TAATCATGGATTTGACTGACACCTTGGCGAAGATTGTTTCGATTCAGATTAAGGATTAGTTATGGTTCTGCGACAAATTA AGACTCTAATTAAGCGTTGG
Product: TPR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAYDPQIYSSYELNWQLHTQAGNQCLLAGSYLEALHAYRKAIALAELMLMTAKKERRHPEAIHAYVMACHNLADNLVKLE DFQVAETTMQQALDRVVDLMHATHYFQCLRIEAAKALKMVSLKVYEFYLRLGQQDKARRVFEHNTELAQMFFSQIQPRLL SV
Sequences:
>Translated_162_residues MAYDPQIYSSYELNWQLHTQAGNQCLLAGSYLEALHAYRKAIALAELMLMTAKKERRHPEAIHAYVMACHNLADNLVKLE DFQVAETTMQQALDRVVDLMHATHYFQCLRIEAAKALKMVSLKVYEFYLRLGQQDKARRVFEHNTELAQMFFSQIQPRLL SV >Mature_161_residues AYDPQIYSSYELNWQLHTQAGNQCLLAGSYLEALHAYRKAIALAELMLMTAKKERRHPEAIHAYVMACHNLADNLVKLED FQVAETTMQQALDRVVDLMHATHYFQCLRIEAAKALKMVSLKVYEFYLRLGQQDKARRVFEHNTELAQMFFSQIQPRLLS V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18822; Mature: 18691
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDPQIYSSYELNWQLHTQAGNQCLLAGSYLEALHAYRKAIALAELMLMTAKKERRHPE CCCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIHAYVMACHNLADNLVKLEDFQVAETTMQQALDRVVDLMHATHYFQCLRIEAAKALKMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLKVYEFYLRLGQQDKARRVFEHNTELAQMFFSQIQPRLLSV HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYDPQIYSSYELNWQLHTQAGNQCLLAGSYLEALHAYRKAIALAELMLMTAKKERRHPE CCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIHAYVMACHNLADNLVKLEDFQVAETTMQQALDRVVDLMHATHYFQCLRIEAAKALKMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLKVYEFYLRLGQQDKARRVFEHNTELAQMFFSQIQPRLLSV HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA