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The map label for this gene is sodN [H]

Identifier: 158333705

GI number: 158333705

Start: 485384

End: 485863

Strand: Reverse

Name: sodN [H]

Synonym: AM1_0511

Alternate gene names: 158333705

Gene position: 485863-485384 (Counterclockwise)

Preceding gene: 158333706

Following gene: 158333704

Centisome position: 7.47

GC content: 44.79

Gene sequence:

>480_bases
ATGGTTCTGCGACAAATTAAGACTCTAATTAAGCGTTGGTTCCCGACTCCTGTTGCTCACGCTCACTGTGATGGTCCCTG
TGGGGTATATGATCCAGCGACAGCCAGAATTTATACCGAAGCGGTAGTGTCGATGACACGTAAGATTTTGGATCTGCAAC
CACCAGCCGATCAAAACCCGCAGGCTATGGCGACTTATCTGAATACGATGTCGCGATATATCCAAATTAAAGAAGAGCAG
GCTCAAAAGGCTAAAGAAGAAATTTTAATCCTGTGGACGGACTATTTTAAGCCTCAGCACCTAGAGCAGTATCCCAATCT
GCACGATATGTTTTGGAAAGCAGCTAAGCTTTGTTCTTCTTGCAAGGTGGAGGTCAATCTCCAGCATGCAGAGGAGTTGC
TAGCAGCAGTTGAAGAAGTTCATAAAGTCTTTTGGGCAACTAAAAACCGAACGGATGTGTCTTGGTACAAAGCTAGTTAA

Upstream 100 bases:

>100_bases
TTTTTTAGTCAGATACAACCCCGGTTGTTGAGTGTATAGTAATCATGGATTTGACTGACACCTTGGCGAAGATTGTTTCG
ATTCAGATTAAGGATTAGTT

Downstream 100 bases:

>100_bases
ACCAGATTTCCCCGTAAGTTCACCACTCCCAGACTGCTCAGTTTGGGAGTTCTTGCTATGGTGCTGTCGACGACGACGGC
GTTGGGAGGTGCAGGGGCGA

Product: Ni-containing superoxide dismutase

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MVLRQIKTLIKRWFPTPVAHAHCDGPCGVYDPATARIYTEAVVSMTRKILDLQPPADQNPQAMATYLNTMSRYIQIKEEQ
AQKAKEEILILWTDYFKPQHLEQYPNLHDMFWKAAKLCSSCKVEVNLQHAEELLAAVEEVHKVFWATKNRTDVSWYKAS

Sequences:

>Translated_159_residues
MVLRQIKTLIKRWFPTPVAHAHCDGPCGVYDPATARIYTEAVVSMTRKILDLQPPADQNPQAMATYLNTMSRYIQIKEEQ
AQKAKEEILILWTDYFKPQHLEQYPNLHDMFWKAAKLCSSCKVEVNLQHAEELLAAVEEVHKVFWATKNRTDVSWYKAS
>Mature_159_residues
MVLRQIKTLIKRWFPTPVAHAHCDGPCGVYDPATARIYTEAVVSMTRKILDLQPPADQNPQAMATYLNTMSRYIQIKEEQ
AQKAKEEILILWTDYFKPQHLEQYPNLHDMFWKAAKLCSSCKVEVNLQHAEELLAAVEEVHKVFWATKNRTDVSWYKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:
GO:0004784: Ni-containing superoxide dismutase, putative
GO:0016151: Ni-containing superoxide dismutase, putative
GO:0016209: Ni-containing superoxide dismutase, putative

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18449; Mature: 18449

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLRQIKTLIKRWFPTPVAHAHCDGPCGVYDPATARIYTEAVVSMTRKILDLQPPADQNP
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
QAMATYLNTMSRYIQIKEEQAQKAKEEILILWTDYFKPQHLEQYPNLHDMFWKAAKLCSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH
CKVEVNLQHAEELLAAVEEVHKVFWATKNRTDVSWYKAS
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
>Mature Secondary Structure
MVLRQIKTLIKRWFPTPVAHAHCDGPCGVYDPATARIYTEAVVSMTRKILDLQPPADQNP
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
QAMATYLNTMSRYIQIKEEQAQKAKEEILILWTDYFKPQHLEQYPNLHDMFWKAAKLCSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH
CKVEVNLQHAEELLAAVEEVHKVFWATKNRTDVSWYKAS
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]