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The map label for this gene is 158333398

Identifier: 158333398

GI number: 158333398

Start: 170571

End: 170981

Strand: Reverse

Name: 158333398

Synonym: AM1_0170

Alternate gene names: NA

Gene position: 170981-170571 (Counterclockwise)

Preceding gene: 158333399

Following gene: 158333397

Centisome position: 2.63

GC content: 44.04

Gene sequence:

>411_bases
ATGAAATTTGCTCAACAAGAATCGACGATTCCCGAAATTAACTTGATTCCCATGCTCAACGTGATGATGGGAATCTTGGC
TTTTTTTGTGATGATCACCATGACCTTGAGCAAGCAAAAAAGCTTAGAGGTTCAACTTCCTCAAGAAGCAGGTGGGCAAC
AGGAGATCAAACTCTCGGATCTTAAAAATCAATTTGTGGTGGATCTAGATAACCAAGGTCAGGCATCCCGGGACAAGCAG
TCCATCTCTGATAAAGAGCTACAGGCCAAGGTCCGCCAGTATTTGCTGGATAATCCCAAGGGCAATGTGTTTTTGAAGCC
AAACCCCAAATTGACTTACGAAAAGATGATGCACAAACTCGATCTGATGCGAGCTGCCGGGGGTGAGCGCGTGTCTTTAA
TTATTGAATAA

Upstream 100 bases:

>100_bases
TGCCTATTTGCCAAAAGGCAGTTCAGTTGAACCTACCCAGGTTACTTTAGAAACTCTGTAAAGGTATTGCTGCTGCCCTT
GGTACTTTGCATTCAAATCT

Downstream 100 bases:

>100_bases
ATTTATGCGTTTTCGATCTCGCAAAACTGGTTCTCAAATCCCAGAGGTGAATTTGGTGCCTTTGATGGATGTATTAATGT
CTGTGCTGACGTTTTTTATC

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKFAQQESTIPEINLIPMLNVMMGILAFFVMITMTLSKQKSLEVQLPQEAGGQQEIKLSDLKNQFVVDLDNQGQASRDKQ
SISDKELQAKVRQYLLDNPKGNVFLKPNPKLTYEKMMHKLDLMRAAGGERVSLIIE

Sequences:

>Translated_136_residues
MKFAQQESTIPEINLIPMLNVMMGILAFFVMITMTLSKQKSLEVQLPQEAGGQQEIKLSDLKNQFVVDLDNQGQASRDKQ
SISDKELQAKVRQYLLDNPKGNVFLKPNPKLTYEKMMHKLDLMRAAGGERVSLIIE
>Mature_136_residues
MKFAQQESTIPEINLIPMLNVMMGILAFFVMITMTLSKQKSLEVQLPQEAGGQQEIKLSDLKNQFVVDLDNQGQASRDKQ
SISDKELQAKVRQYLLDNPKGNVFLKPNPKLTYEKMMHKLDLMRAAGGERVSLIIE

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15437; Mature: 15437

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAQQESTIPEINLIPMLNVMMGILAFFVMITMTLSKQKSLEVQLPQEAGGQQEIKLSD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCEEEHHC
LKNQFVVDLDNQGQASRDKQSISDKELQAKVRQYLLDNPKGNVFLKPNPKLTYEKMMHKL
CCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
DLMRAAGGERVSLIIE
HHHHHCCCCEEEEEEC
>Mature Secondary Structure
MKFAQQESTIPEINLIPMLNVMMGILAFFVMITMTLSKQKSLEVQLPQEAGGQQEIKLSD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCEEEHHC
LKNQFVVDLDNQGQASRDKQSISDKELQAKVRQYLLDNPKGNVFLKPNPKLTYEKMMHKL
CCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
DLMRAAGGERVSLIIE
HHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]