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The map label for this gene is 158333397

Identifier: 158333397

GI number: 158333397

Start: 170141

End: 170566

Strand: Reverse

Name: 158333397

Synonym: AM1_0169

Alternate gene names: NA

Gene position: 170566-170141 (Counterclockwise)

Preceding gene: 158333398

Following gene: 158333396

Centisome position: 2.62

GC content: 42.72

Gene sequence:

>426_bases
ATGCGTTTTCGATCTCGCAAAACTGGTTCTCAAATCCCAGAGGTGAATTTGGTGCCTTTGATGGATGTATTAATGTCTGT
GCTGACGTTTTTTATCATCATTTCCATGACCTTAACGGGGCAACAGGTTTTGCAAGTGACCTTGCCAACTTCAAATACTG
CCTCAATAGATAATAATAAGCTGCCGCAGCAGGCCAATCCGCTGGTTGTAGGGCTGACATTGAAGGAGGAAATCATTTTA
GATAATGAGCCTGTCAATTCTGGCAAACTTGCAAATCGTATCTCTACTTATATTGACAAAAACCCGCAAGGAAGAATCAT
TTTGAGTGCCGACCGGAAACTACCCTACTCAAAGGTTTCTGCACTGCTCAAAAAAATGGGAAAAATGGGGGGCGATCGTA
TATCACTTCTCCTGCAGGACAAATAG

Upstream 100 bases:

>100_bases
AAGCCAAACCCCAAATTGACTTACGAAAAGATGATGCACAAACTCGATCTGATGCGAGCTGCCGGGGGTGAGCGCGTGTC
TTTAATTATTGAATAAATTT

Downstream 100 bases:

>100_bases
AAAAATTGAAGATTTAGATATTTTTCTCTGGGCGACAAACTTAACCTGGCAATAACATTCCCATAAACCAAATCAGCATT
TTCCATTAACTGACCTTAAT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRFRSRKTGSQIPEVNLVPLMDVLMSVLTFFIIISMTLTGQQVLQVTLPTSNTASIDNNKLPQQANPLVVGLTLKEEIIL
DNEPVNSGKLANRISTYIDKNPQGRIILSADRKLPYSKVSALLKKMGKMGGDRISLLLQDK

Sequences:

>Translated_141_residues
MRFRSRKTGSQIPEVNLVPLMDVLMSVLTFFIIISMTLTGQQVLQVTLPTSNTASIDNNKLPQQANPLVVGLTLKEEIIL
DNEPVNSGKLANRISTYIDKNPQGRIILSADRKLPYSKVSALLKKMGKMGGDRISLLLQDK
>Mature_141_residues
MRFRSRKTGSQIPEVNLVPLMDVLMSVLTFFIIISMTLTGQQVLQVTLPTSNTASIDNNKLPQQANPLVVGLTLKEEIIL
DNEPVNSGKLANRISTYIDKNPQGRIILSADRKLPYSKVSALLKKMGKMGGDRISLLLQDK

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15607; Mature: 15607

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRSRKTGSQIPEVNLVPLMDVLMSVLTFFIIISMTLTGQQVLQVTLPTSNTASIDNNK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
LPQQANPLVVGLTLKEEIILDNEPVNSGKLANRISTYIDKNPQGRIILSADRKLPYSKVS
CCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH
ALLKKMGKMGGDRISLLLQDK
HHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MRFRSRKTGSQIPEVNLVPLMDVLMSVLTFFIIISMTLTGQQVLQVTLPTSNTASIDNNK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
LPQQANPLVVGLTLKEEIILDNEPVNSGKLANRISTYIDKNPQGRIILSADRKLPYSKVS
CCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH
ALLKKMGKMGGDRISLLLQDK
HHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]