| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333246
Identifier: 158333246
GI number: 158333246
Start: 12895
End: 14004
Strand: Reverse
Name: 158333246
Synonym: AM1_0015
Alternate gene names: NA
Gene position: 14004-12895 (Counterclockwise)
Preceding gene: 158333247
Following gene: 158333245
Centisome position: 0.22
GC content: 47.03
Gene sequence:
>1110_bases ATGACGGGCTTATCCCAGCGAACAAGAGAGCAAGGTTCCAGACTTAAAGGTCTAGAGTTTTTATCGGCATTGATCGTAGT GGCTGGAGGGATCACGACCTGTGTGACCCAAAACATGGTGTTGGCTGCAGCCCCTCTAAGTGTGGCCGTTGCCCTCAATT TGCATAATCGGCGTCAGATGGATCGTCTGACTGAATACTATGCAGGATTAAGACGGAATACGATTCAAATCGCCTTACGG CAGGACCTACAGGTGATTCAGGCTTATGTGTCCCTACATCAACGAAATAACACCGAGTCTGAGTTAGCTCAATTTCATCA GTCTATTGATGCTTTGTTAGATGAAATTAAGCGTCTGGAAGCCCGACAGAAGGGTGGGGTAGATGCGAAAAAATTACCGA TCTTCCTGGATCAGATTGAAGGCTTAAAAGAGCAAGTCCAAAATTGCGGACAGACGCTAATGGCCCTAATGCAAGACTTA CAGGAAATCAGCACCCCTACAGCTAGGTTGGCAGCTATGTCAGCTCTGAAAACGACCCTACAACGCTACCAAAATACTCC GCGCTCGATAGATCAAAACCCAAAAGTAGCAGAACTGGTTCGAGATTGGTGTGGGGAGGTGCAGTCTTTACAGGCTCAGC TAGACACTCTTACTTCCTCTATGAACCAGAAAAATTCGTCTGATCTCGCAACCTCGCAGGGAGAGAGTTTAAGTTGCCTT TATGAACAAAGTTCATCTTTAGATCATCGGTTGGTATCTATCCAAAAGGTGTTATCAGAACAATTGCTCCCCTTCAATAC GGATCAACAGAACCTGCAGCGTTCTCTCCATCAGCTGCAGGAGGAGATGGCAAGGTTGCATCCCGATCTCAATAGCGTGA AGTCGTCAACATCCGATACGGCCCTTTCTCCGATTCAGATTGAAGAACAAATCGTGGTGGCACTAACCCCCTTGCAAGTT CAGTATGTGTCCCTTGTCAATGACCTGGAGCTGCTTGAGGTAGATATGCAAGGGCTTGTGTACCAAGCTCGCCAGTTACG GCACATCCAGCGGCAATTATTAGCCATTCATCAACAGATGCAGTGGATCACCCAAATTGATGGAGATTGA
Upstream 100 bases:
>100_bases GGGGGACCTAAAGAGAGAATAAGAATTTAAGAGCGAGAGATGGGCAAGGAATAGAGGTAATCCCGCATTTTGATAGCCAA GGCATGTAGGACGAACAGCC
Downstream 100 bases:
>100_bases TGTTTGAGCCAAGTATGAAGAAAATCCTGGCGCTATCTTGATCCCCAAAAAGGCTGACTGATACTGGAAAAACAGAAATT TCAAAACCGGTACCGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTGLSQRTREQGSRLKGLEFLSALIVVAGGITTCVTQNMVLAAAPLSVAVALNLHNRRQMDRLTEYYAGLRRNTIQIALR QDLQVIQAYVSLHQRNNTESELAQFHQSIDALLDEIKRLEARQKGGVDAKKLPIFLDQIEGLKEQVQNCGQTLMALMQDL QEISTPTARLAAMSALKTTLQRYQNTPRSIDQNPKVAELVRDWCGEVQSLQAQLDTLTSSMNQKNSSDLATSQGESLSCL YEQSSSLDHRLVSIQKVLSEQLLPFNTDQQNLQRSLHQLQEEMARLHPDLNSVKSSTSDTALSPIQIEEQIVVALTPLQV QYVSLVNDLELLEVDMQGLVYQARQLRHIQRQLLAIHQQMQWITQIDGD
Sequences:
>Translated_369_residues MTGLSQRTREQGSRLKGLEFLSALIVVAGGITTCVTQNMVLAAAPLSVAVALNLHNRRQMDRLTEYYAGLRRNTIQIALR QDLQVIQAYVSLHQRNNTESELAQFHQSIDALLDEIKRLEARQKGGVDAKKLPIFLDQIEGLKEQVQNCGQTLMALMQDL QEISTPTARLAAMSALKTTLQRYQNTPRSIDQNPKVAELVRDWCGEVQSLQAQLDTLTSSMNQKNSSDLATSQGESLSCL YEQSSSLDHRLVSIQKVLSEQLLPFNTDQQNLQRSLHQLQEEMARLHPDLNSVKSSTSDTALSPIQIEEQIVVALTPLQV QYVSLVNDLELLEVDMQGLVYQARQLRHIQRQLLAIHQQMQWITQIDGD >Mature_368_residues TGLSQRTREQGSRLKGLEFLSALIVVAGGITTCVTQNMVLAAAPLSVAVALNLHNRRQMDRLTEYYAGLRRNTIQIALRQ DLQVIQAYVSLHQRNNTESELAQFHQSIDALLDEIKRLEARQKGGVDAKKLPIFLDQIEGLKEQVQNCGQTLMALMQDLQ EISTPTARLAAMSALKTTLQRYQNTPRSIDQNPKVAELVRDWCGEVQSLQAQLDTLTSSMNQKNSSDLATSQGESLSCLY EQSSSLDHRLVSIQKVLSEQLLPFNTDQQNLQRSLHQLQEEMARLHPDLNSVKSSTSDTALSPIQIEEQIVVALTPLQVQ YVSLVNDLELLEVDMQGLVYQARQLRHIQRQLLAIHQQMQWITQIDGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41504; Mature: 41373
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLSQRTREQGSRLKGLEFLSALIVVAGGITTCVTQNMVLAAAPLSVAVALNLHNRRQM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DRLTEYYAGLRRNTIQIALRQDLQVIQAYVSLHQRNNTESELAQFHQSIDALLDEIKRLE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ARQKGGVDAKKLPIFLDQIEGLKEQVQNCGQTLMALMQDLQEISTPTARLAAMSALKTTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QRYQNTPRSIDQNPKVAELVRDWCGEVQSLQAQLDTLTSSMNQKNSSDLATSQGESLSCL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHH YEQSSSLDHRLVSIQKVLSEQLLPFNTDQQNLQRSLHQLQEEMARLHPDLNSVKSSTSDT HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC ALSPIQIEEQIVVALTPLQVQYVSLVNDLELLEVDMQGLVYQARQLRHIQRQLLAIHQQM CCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWITQIDGD HHHHHCCCC >Mature Secondary Structure TGLSQRTREQGSRLKGLEFLSALIVVAGGITTCVTQNMVLAAAPLSVAVALNLHNRRQM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DRLTEYYAGLRRNTIQIALRQDLQVIQAYVSLHQRNNTESELAQFHQSIDALLDEIKRLE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ARQKGGVDAKKLPIFLDQIEGLKEQVQNCGQTLMALMQDLQEISTPTARLAAMSALKTTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QRYQNTPRSIDQNPKVAELVRDWCGEVQSLQAQLDTLTSSMNQKNSSDLATSQGESLSCL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHH YEQSSSLDHRLVSIQKVLSEQLLPFNTDQQNLQRSLHQLQEEMARLHPDLNSVKSSTSDT HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC ALSPIQIEEQIVVALTPLQVQYVSLVNDLELLEVDMQGLVYQARQLRHIQRQLLAIHQQM CCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWITQIDGD HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA