| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319037
Identifier: 158319037
GI number: 158319037
Start: 8948901
End: 8950331
Strand: Direct
Name: 158319037
Synonym: Franean1_7320
Alternate gene names: NA
Gene position: 8948901-8950331 (Clockwise)
Preceding gene: 158319035
Following gene: 158319039
Centisome position: 99.63
GC content: 73.65
Gene sequence:
>1431_bases GTGGCCTGGACCGGCAACCTGCGCGCGCTGCTCGGCGGTCGCGCGTTCCGGCAGCTCTACGCGTGCCGCCTGACGTCACA GGCCGCCGACGGCGTGTTCCAGGCGAGCCTCGTCAGCTATGTGCTGTTCTCCCCGGAGCGCGCGACGTCCGCCGGGGCAC TGGCCGCGTCTCTCGCCGTGGTCGTGCTGCCGTTCAGCGTCATCGGGCCGTTCGCCGGCATCGTGCTGGACCGGGTCTCC CGCCAGCGGGTACTCGTTGTCTCCTCTGTGGTCCGCACGCTGCTGATGATCGTGCTCGTCGGCCTGATCCTCGGCGGGCG CACCGGCGCCGACTTCTACGCGACGGCGCTGGCCTCGGTGAGCGTGAACAGGTTCGTCCTGGCAGCGCTGTCCGCAGGCC TCCCGATGGTCGTCAACGTCGACCGGCTCGTGACGGCCAACGCCCTGTCGGTCACCTCCGGAACTGTCGCCACCCTGGTC GGGGCCGGTGTCGGCAGCGGGCTGCGCGGCCTCACCGACGGCGATGACCGGGCCGTCGCGCTGGTGGCGGGCCTGGCGGC CCTCGCCTACATCGTCGCCGCCGTCACCGCGGCACGCCCCGCCCGCCTCGCCTTCGGCCCGGTCGAGACGATGCCCTGGC AGGGTGCCTGGTCGCAGGCCCGGCACGTTGTCGCCGACATGGTGGACGGCGTCCGTTACCTGTGGAACCACGGCCCCGCC CGGCGCGCGCTCGCCGCGCTGACGACGTCCCGCGCCGCCTACGGGCTGGTGCTCGTCATGACGGTACTGCTGTACCGCAA CCACTTCACCGGGCCCGGCGGGGGGCTGGCCGGGCTCGCGGCGGTGGTCGCGGCGAGCGGCGCGGGGACGATCCTCGCCG CCGTCGTCACCCCCCGGGTGACCCGGCGGATGCCGAAGGCCACCTGGATCGCGATCGTCCTCGGCGCGGGCGGAGTCGTC GAGGTGGTCCTGGGGCTGCCGTACCTCTCCCCGCTGTACATCACCGCCGGGTTGCTCCTCGGTTTCTCCGCGCAGGCGAG CAAGATCTGCGTCGACACGATCGTGCAGGAGGAGACCCACGACGCCTACCGGGGGCGGGCGTTCTCCCTCTACGACCTGC TGTTCAATGTGGCCTTCGTGGCCGCGGCCGCGGTCGCCGCGGTGGTGGTTCCGGAGGACGGGAGGTCCTCGCCGACCATC ATCGCCGCGGGCATCGGCTACAGCCTGGCGGGCCTCCTCTACTACCGGGCCGCCATGCGCCACCCCGAGGACCGGATGAT CCGCGGCGTCGGCGAATCCCGCGCCGACACACCCGCCTCCTCCGACGCCCCCGGCCCGACCATGAGCCCGAGCCCGAGCC CGAGGCCAACCTCGGGCCCAGGCCGACCTGCGGGCCCGGTCTCAGCCACCGGGCCGGGCCCGGCCCGGTGA
Upstream 100 bases:
>100_bases GTCCGGCCATAGGGATCGTCGCCGTCCGCTGTGCTCGCAGAGTGATCCGTCATGCCGCCCGGCGACCCGGGGCGTCCGCC GGCTCCGTAGGCTGGCCGTC
Downstream 100 bases:
>100_bases CGCCGAAGCGAGCCCCGGGCTGGCACGAACCCCGGGCTGGCATCAGGATCAGGCGTCAGGGGCCTCGTCCGGGGTGGGAG TTTCGCCGGGGATGACGATG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MAWTGNLRALLGGRAFRQLYACRLTSQAADGVFQASLVSYVLFSPERATSAGALAASLAVVVLPFSVIGPFAGIVLDRVS RQRVLVVSSVVRTLLMIVLVGLILGGRTGADFYATALASVSVNRFVLAALSAGLPMVVNVDRLVTANALSVTSGTVATLV GAGVGSGLRGLTDGDDRAVALVAGLAALAYIVAAVTAARPARLAFGPVETMPWQGAWSQARHVVADMVDGVRYLWNHGPA RRALAALTTSRAAYGLVLVMTVLLYRNHFTGPGGGLAGLAAVVAASGAGTILAAVVTPRVTRRMPKATWIAIVLGAGGVV EVVLGLPYLSPLYITAGLLLGFSAQASKICVDTIVQEETHDAYRGRAFSLYDLLFNVAFVAAAAVAAVVVPEDGRSSPTI IAAGIGYSLAGLLYYRAAMRHPEDRMIRGVGESRADTPASSDAPGPTMSPSPSPRPTSGPGRPAGPVSATGPGPAR
Sequences:
>Translated_476_residues MAWTGNLRALLGGRAFRQLYACRLTSQAADGVFQASLVSYVLFSPERATSAGALAASLAVVVLPFSVIGPFAGIVLDRVS RQRVLVVSSVVRTLLMIVLVGLILGGRTGADFYATALASVSVNRFVLAALSAGLPMVVNVDRLVTANALSVTSGTVATLV GAGVGSGLRGLTDGDDRAVALVAGLAALAYIVAAVTAARPARLAFGPVETMPWQGAWSQARHVVADMVDGVRYLWNHGPA RRALAALTTSRAAYGLVLVMTVLLYRNHFTGPGGGLAGLAAVVAASGAGTILAAVVTPRVTRRMPKATWIAIVLGAGGVV EVVLGLPYLSPLYITAGLLLGFSAQASKICVDTIVQEETHDAYRGRAFSLYDLLFNVAFVAAAAVAAVVVPEDGRSSPTI IAAGIGYSLAGLLYYRAAMRHPEDRMIRGVGESRADTPASSDAPGPTMSPSPSPRPTSGPGRPAGPVSATGPGPAR >Mature_475_residues AWTGNLRALLGGRAFRQLYACRLTSQAADGVFQASLVSYVLFSPERATSAGALAASLAVVVLPFSVIGPFAGIVLDRVSR QRVLVVSSVVRTLLMIVLVGLILGGRTGADFYATALASVSVNRFVLAALSAGLPMVVNVDRLVTANALSVTSGTVATLVG AGVGSGLRGLTDGDDRAVALVAGLAALAYIVAAVTAARPARLAFGPVETMPWQGAWSQARHVVADMVDGVRYLWNHGPAR RALAALTTSRAAYGLVLVMTVLLYRNHFTGPGGGLAGLAAVVAASGAGTILAAVVTPRVTRRMPKATWIAIVLGAGGVVE VVLGLPYLSPLYITAGLLLGFSAQASKICVDTIVQEETHDAYRGRAFSLYDLLFNVAFVAAAAVAAVVVPEDGRSSPTII AAGIGYSLAGLLYYRAAMRHPEDRMIRGVGESRADTPASSDAPGPTMSPSPSPRPTSGPGRPAGPVSATGPGPAR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48793; Mature: 48662
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWTGNLRALLGGRAFRQLYACRLTSQAADGVFQASLVSYVLFSPERATSAGALAASLAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVLPFSVIGPFAGIVLDRVSRQRVLVVSSVVRTLLMIVLVGLILGGRTGADFYATALASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SVNRFVLAALSAGLPMVVNVDRLVTANALSVTSGTVATLVGAGVGSGLRGLTDGDDRAVA HHHHHHHHHHHCCCCEEEEHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCHHHH LVAGLAALAYIVAAVTAARPARLAFGPVETMPWQGAWSQARHVVADMVDGVRYLWNHGPA HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RRALAALTTSRAAYGLVLVMTVLLYRNHFTGPGGGLAGLAAVVAASGAGTILAAVVTPRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH TRRMPKATWIAIVLGAGGVVEVVLGLPYLSPLYITAGLLLGFSAQASKICVDTIVQEETH HHHCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DAYRGRAFSLYDLLFNVAFVAAAAVAAVVVPEDGRSSPTIIAAGIGYSLAGLLYYRAAMR HHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHC HPEDRMIRGVGESRADTPASSDAPGPTMSPSPSPRPTSGPGRPAGPVSATGPGPAR CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWTGNLRALLGGRAFRQLYACRLTSQAADGVFQASLVSYVLFSPERATSAGALAASLAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVLPFSVIGPFAGIVLDRVSRQRVLVVSSVVRTLLMIVLVGLILGGRTGADFYATALASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SVNRFVLAALSAGLPMVVNVDRLVTANALSVTSGTVATLVGAGVGSGLRGLTDGDDRAVA HHHHHHHHHHHCCCCEEEEHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCHHHH LVAGLAALAYIVAAVTAARPARLAFGPVETMPWQGAWSQARHVVADMVDGVRYLWNHGPA HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RRALAALTTSRAAYGLVLVMTVLLYRNHFTGPGGGLAGLAAVVAASGAGTILAAVVTPRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH TRRMPKATWIAIVLGAGGVVEVVLGLPYLSPLYITAGLLLGFSAQASKICVDTIVQEETH HHHCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DAYRGRAFSLYDLLFNVAFVAAAAVAAVVVPEDGRSSPTIIAAGIGYSLAGLLYYRAAMR HHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHC HPEDRMIRGVGESRADTPASSDAPGPTMSPSPSPRPTSGPGRPAGPVSATGPGPAR CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]