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The map label for this gene is tnpA1 [H]

Identifier: 158318975

GI number: 158318975

Start: 8860377

End: 8860799

Strand: Reverse

Name: tnpA1 [H]

Synonym: Franean1_7258

Alternate gene names: 158318975

Gene position: 8860799-8860377 (Counterclockwise)

Preceding gene: 158318978

Following gene: 158318974

Centisome position: 98.65

GC content: 67.85

Gene sequence:

>423_bases
ATGGTTCGGCGGGCGGCGGTGGGCGCGGGTGGCGTCTACGACCTCGGGTACCACGTCGTGTGGTGCCCGAAGTACCGCCG
TCCCGTGCCCGCCGGGCCGATCGGTGCCCGCTGCGGCGAACTGGTTCGCGAGAGGTGCGCCGAACGCGACTGGTCGGTCA
TCGCGCTGGAAGTCATGCCCGACCACGTGCACCTGTTCGTCAAGGCTCACCCGAAGCACTCCCCGTCGTATGTCGCCAAC
CAGCTCAAGGGTTTCCCCTCGCATGTGCTGGGTGAGGAGTTCGGGCACCTGTGGTCCCGGCTTCCCACCCTGTGGTCACG
GTTGTACTTCGTGGCCGCTGTCGGTGTGGTGTCCGTGGACACGGTCCGCCGGTACATCGACACCCAGTACGAGTGGCCGT
GGCGCATGGAGCACGCCCGGTGA

Upstream 100 bases:

>100_bases
TCCATCAGGCGCTCCCGAGGGGATTGGCGCCTTCAGCCGTCAGGGGAATCGGGTATGGACCGTAGCCCTGGTAGGTGTGC
GGCGCTGGCATACTTGGATC

Downstream 100 bases:

>100_bases
GACGTTCCTTCAAGTTCCAGCTTCGCCCGACCGCCCGGCAGGCCGCGGCGCTGAGTGTGATGCTTGGCGACCATCGGGCG
CTGTACAACGCCGCGTTGCA

Product: transposase IS200-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVRRAAVGAGGVYDLGYHVVWCPKYRRPVPAGPIGARCGELVRERCAERDWSVIALEVMPDHVHLFVKAHPKHSPSYVAN
QLKGFPSHVLGEEFGHLWSRLPTLWSRLYFVAAVGVVSVDTVRRYIDTQYEWPWRMEHAR

Sequences:

>Translated_140_residues
MVRRAAVGAGGVYDLGYHVVWCPKYRRPVPAGPIGARCGELVRERCAERDWSVIALEVMPDHVHLFVKAHPKHSPSYVAN
QLKGFPSHVLGEEFGHLWSRLPTLWSRLYFVAAVGVVSVDTVRRYIDTQYEWPWRMEHAR
>Mature_140_residues
MVRRAAVGAGGVYDLGYHVVWCPKYRRPVPAGPIGARCGELVRERCAERDWSVIALEVMPDHVHLFVKAHPKHSPSYVAN
QLKGFPSHVLGEEFGHLWSRLPTLWSRLYFVAAVGVVSVDTVRRYIDTQYEWPWRMEHAR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRAAVGAGGVYDLGYHVVWCPKYRRPVPAGPIGARCGELVRERCAERDWSVIALEVMP
CCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
DHVHLFVKAHPKHSPSYVANQLKGFPSHVLGEEFGHLWSRLPTLWSRLYFVAAVGVVSVD
CEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVRRYIDTQYEWPWRMEHAR
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRRAAVGAGGVYDLGYHVVWCPKYRRPVPAGPIGARCGELVRERCAERDWSVIALEVMP
CCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
DHVHLFVKAHPKHSPSYVANQLKGFPSHVLGEEFGHLWSRLPTLWSRLYFVAAVGVVSVD
CEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVRRYIDTQYEWPWRMEHAR
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]