| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318978
Identifier: 158318978
GI number: 158318978
Start: 8864456
End: 8865157
Strand: Reverse
Name: 158318978
Synonym: Franean1_7261
Alternate gene names: NA
Gene position: 8865157-8864456 (Counterclockwise)
Preceding gene: 158318979
Following gene: 158318975
Centisome position: 98.7
GC content: 75.5
Gene sequence:
>702_bases GTGGCAGGACGTCCGGCCTGGCTGCAGGGGGGGTCGTGGCGGATCGCCGAGCCGCCCCTGACCCCGGCGGCGACAGGTGC CGCGGTGCTCGGCGCGGTCGTGCTGGTCGTCGGGTGCGTCCTGACCGCCGGATCGGGCTTCGACGAGGGCTCCACGGCGA CAACGCCGGTGGGAGTAGAAGTCGATCAGGGCCCGCTGGCCTCCTGGTACACGTCCACCCAGGGGATGCGCGGCAGTATC GCCACCAGCGTCGCGTCCGCGCGCGCCTTCCTCGACGCCCAGGACGGCGCCTCACTGCGCCCGCTGTGCATCCAACTGGC GGCGGAGGGGCAGCAGGCGGGCGGGCTCACACCCGGGCCGGACCAGGAGGCGCAGCGGCTCTTCACCAGCGGCGCCGGGC ACTACGAGGCTGCCGCGCGCACCTGCGCCCAACTCTTCGACGGCACGCAGATCCCCGCCGCGCAGCTACAGGCACAGGTC CGGGCGGCGCTGGCCGACGGCGACCGCGACTGGGACGCGCTGGCCACCCGCGTCGGCCTTCCCATGGCCCATGCCGGGCC GACTCCACCGGCCGCTACCGACGGCTCGGGCGGCACGGGCGGCACGGCAGCCACCGATGGCACGGGCGGTACCGGCGACA CAGACGCCACGGGTGGGACGGACGGCAGCGGTGCCCCGGAGGACACGAGTGCGTCCGGGTGA
Upstream 100 bases:
>100_bases CGGCCCGGTGACCAGCACTGAGGTCATTTGAGGCGGCGGAATGTCCGTCCCGTACCCTTTGCTCGCGGTAATACGGTGGC GGGCAATCCGGGGGTGGTGG
Downstream 100 bases:
>100_bases GACCTCCGCCGTGCGGACCCGCGCGGCCGTGCCGGCTCCGAAGGCCGTGCGGCACGGCCGCGCGGGTCCGGGCCCGGTGG GTGTGCTCAGCCTGCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAGRPAWLQGGSWRIAEPPLTPAATGAAVLGAVVLVVGCVLTAGSGFDEGSTATTPVGVEVDQGPLASWYTSTQGMRGSI ATSVASARAFLDAQDGASLRPLCIQLAAEGQQAGGLTPGPDQEAQRLFTSGAGHYEAAARTCAQLFDGTQIPAAQLQAQV RAALADGDRDWDALATRVGLPMAHAGPTPPAATDGSGGTGGTAATDGTGGTGDTDATGGTDGSGAPEDTSASG
Sequences:
>Translated_233_residues MAGRPAWLQGGSWRIAEPPLTPAATGAAVLGAVVLVVGCVLTAGSGFDEGSTATTPVGVEVDQGPLASWYTSTQGMRGSI ATSVASARAFLDAQDGASLRPLCIQLAAEGQQAGGLTPGPDQEAQRLFTSGAGHYEAAARTCAQLFDGTQIPAAQLQAQV RAALADGDRDWDALATRVGLPMAHAGPTPPAATDGSGGTGGTAATDGTGGTGDTDATGGTDGSGAPEDTSASG >Mature_232_residues AGRPAWLQGGSWRIAEPPLTPAATGAAVLGAVVLVVGCVLTAGSGFDEGSTATTPVGVEVDQGPLASWYTSTQGMRGSIA TSVASARAFLDAQDGASLRPLCIQLAAEGQQAGGLTPGPDQEAQRLFTSGAGHYEAAARTCAQLFDGTQIPAAQLQAQVR AALADGDRDWDALATRVGLPMAHAGPTPPAATDGSGGTGGTAATDGTGGTGDTDATGGTDGSGAPEDTSASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22750; Mature: 22619
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRPAWLQGGSWRIAEPPLTPAATGAAVLGAVVLVVGCVLTAGSGFDEGSTATTPVGVE CCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE VDQGPLASWYTSTQGMRGSIATSVASARAFLDAQDGASLRPLCIQLAAEGQQAGGLTPGP ECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCCC DQEAQRLFTSGAGHYEAAARTCAQLFDGTQIPAAQLQAQVRAALADGDRDWDALATRVGL CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC PMAHAGPTPPAATDGSGGTGGTAATDGTGGTGDTDATGGTDGSGAPEDTSASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGRPAWLQGGSWRIAEPPLTPAATGAAVLGAVVLVVGCVLTAGSGFDEGSTATTPVGVE CCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE VDQGPLASWYTSTQGMRGSIATSVASARAFLDAQDGASLRPLCIQLAAEGQQAGGLTPGP ECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCCC DQEAQRLFTSGAGHYEAAARTCAQLFDGTQIPAAQLQAQVRAALADGDRDWDALATRVGL CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC PMAHAGPTPPAATDGSGGTGGTAATDGTGGTGDTDATGGTDGSGAPEDTSASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA